SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp16147_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.29 TPM:1.20
ORF Entry
Sequence
(Nucleotide)
CGCCGCGCCGCCACCCGGGACAGCTCCACCACGGGCCCGTGCTGCCGCTCGCGTAGCATT
GTAGCCATTATCGCCTTTCTAAATGCAGCTTCTTTGACGCTGTGGAACAGCAAATTCCTG
AGAGCATCCAGAGGTCCTTCCAAGATCAATAACGACAGATTCGGGCATATTAGCTCAGAA
AACTGATGCAATAAAACCAGTCGATTGCAGATGAGTTGCGTCGATAGATCTCTGAGCAGG
TGGCACTCGAGCGGCGGCGGGGGCGGAGCCCTAGGAGCCCGAGGCGCTTCTACACAGAGT
GCCACGGTGTGAGCACTGCCGCATGCCACTTTCGTCACTCTTTTGCCCTGCAGAGCCATG
AGGAGTCTCGGTCTTTGAGCAGAGAGCGTGGTCCCGTCTCCAAGCTGCCCTTCGTCGTTG
TCACCCCATGTATAGACCTCGCCCGTGTCCGTACACGCTACGCAATGAAGACTGCCTGTT
GCTATAGACACGATCATTTTCCCTTGCATTCCTGTTACTCTCATCGGGCGTCGTACGTGT
TCGTAGCTGCCGTGCCCGAGTCTGTGGTAGTCCCCTTTGCCCCAAGTGTAAACGCTACCG
CATTGACATAGCGCCACTGAGAACTGCGAGCCGCATTCTACTTTGATAACACGCAATCCC
TTCAAGCAATCTATCCGCATCGGTAGCTTGCATCCGTCTGAGCCGCCACGACCTAATTTT
CCATAGTCGCCGTCGCCCCAAGACCACACGTTGTCATCGTCGGTGATACAAAGGGTTTGC
GCGTCACCGGATCCGCATGCGACATCTATTACGCGTTGGGTTGCCAGCGCTTCAACCAAT
TTAGGCACGAGTTGATCTTCAGAATCTCCATGTCCGAGTCGTCCATACCTCCCTTTGCCC
CAGGTGTAGATGCGTCCTCGAGCAGTCAGGCACGCCGAGTGAGCGCCTCCGCACGCAATG
GCTACCACTTCTAGTCCGGACAGAGCCGTTATTAGCTTAGGACGATCGTAGCTCACTCTG
TTTCCATGACCGAGCTTTCCGTCTTCACCTTCGCCCCAACTATAAACTTCTCCTTCGGCA
GAGAGGGCTAAACAATGTTTTCCACCGGAATTGCATGCGACCTTAGTGATGAACACATGT
TGTATCGATGCCAACAGCGATGGTTGCGAGACCGAATCTATTCCACCAATGCCCAATCTT
CCTCCCGCTCCATAACCTGTTGCATAGACTTTCCCATCTGGGGTGACCGCGAAGAGTGTC
TGTTCACCGCCCACTAGTTGCACGGGGTTCAGAGCCGCGAGGGCGTGGCAGGGAGTAGGC
GTTCGCACTTTAGCCCCTTCAACTCCACCTAATTGCCCGCGATGATTGTGTCCCCAGCCG
TACACGGCACAGCCACGAGAACTACTGCCCCACCAACCAGTCCAGTCCTCTGGACGTTTA
TTGACCCAGTGCAGCAACTGTTCGTCATGCTGCTTTGTGAACTTCGTGTTGTCCTCCCAG
GCGTAGGGCGCCTCGCTG
(1518 bp)

- SilkBase 1999-2023 -