SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp16147_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_11261_[Danaus_plexippus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.52 TPM:0.49
ORF Entry
Sequence
(Nucleotide)
CAGGAGGTCCTACCACCAGTAAAATTCGATTGGCATATGGAGGACAAGATACGTCACGTG
GAGGCCACGTATTGGAAAACTTATGGGACGGCCTCTCGCCTTCTGGATGACCATATGAAA
AAGTGTTGGTCGACGTAGTGATGATGTATCTAACAATGAAGGTAGACAATACCTGCAGAG
CCATGAGGAGTCTCGGTCTTTGAGCAGAGAGCGTGGTCCCGTCTCCAAGCTGCCCTTCGT
CGTTGTCACCCCATGTATAGACCTCGCCCGTGTCCGTACACGCTACGCAATGAAGACTGC
CTGTTGCTATAGACACGATCATTTTCCCTTGCATTCCTGTTACTCTCATCGGGCGTCGTA
CGTGTTCGTAGCTGCCGTGCCCGAGTCTGTGGTAGTCCCCTTTGCCCCAAGTGTAAACGC
TACCGCATTGACATAGCGCCACTGAGAACTGCGAGCCGCATTCTACTTTGATAACACGCA
ATCCCTTCAAGCAATCTATCCGCATCGGTAGCTTGCATCCGTCTGAGCCGCCACGACCTA
ATTTTCCATAGTCGCCGTCGCCCCAAGACCACACGTTGTCATCGTCGGTGATACAAAGGG
TTTGCGCGTCACCGGATCCGCATGCGACATCTATTACGCGTTGGGTTGCCAGCGCTTCAA
CCAATTTAGGCACGAGTTGATCTTCAGAATCTCCATGTCCGAGTCGTCCATACCTCCCTT
TGCCCCAGGTGTAGATGCGTCCTCGAGCAGTCAGGCACGCCGAGTGAGCGCCTCCGCACG
CAATGGCTACCACTTCTAGTCCGGACAGAGCCGTTATTAGCTTAGGACGATCGTAGCTCA
CTCTGTTTCCATGACCGAGCTTTCCGTCTTCACCTTCGCCCCAACTATAAACTTCTCCTT
CGGCAGAGAGGGCTAAACAATGTTTTCCACCGGAATTGCATGCGACCTTAGTGATGAACA
CATGTTGTATCGATGCCAACAGCGATGGTTGCGAGACCGAATCTATTCCACCAATGCCCA
ATCTTCCTCCCGCTCCATAACCTGTTGCATAGACTTTCCCATCTGGGGTGACCGCGAAGA
GTGTCTGTTCACCGCCCACTAGTTGCACGGGGTTCAGAGCCGCGAGGGCGTGGCAGGGAG
TAGGCGTTCGCACTTTAGCCCCTTCAACTCCACCTAATTGCCCGCGATGATTGTGTCCCC
AGCCGTACACGGCACAGCCACGAGAACTACTGCCCCACCAACCAGTCCAGTCCTCTGGAC
GTTTATTGACCCAGTGCAGCAACTGTTCGTCATGCTGCTTTGTGAACTTCGTGTTGTCCT
CCCAGGCGTAGGGCGCCTCGCTG
(1343 bp)

- SilkBase 1999-2023 -