SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp15054_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		very_low-density_lipoprotein_receptor_isoform_1_precursor_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
Transcript
Level		FPKM:5.19 TPM:4.81
ORF Entry
Sequence
(Nucleotide)
GTGAGTTTACTTTGGAGTGGACTAACTTTCGACACATTATAATGATTATACATCATTGGG
CTTGGAATTAAGTTAGATAATGATGAACTACATGTATGTACTGTAACCATCGGATTTTTA
AATAATTAAGTGGGAAAACTATATTAGAAAGGACACTCAATTTACGACGACAAAATAATA
TTACATGTTGCAATGTAATTATTGATAAAATTATTGAGTATTTATTTACATGTGTACAGT
CTTTTTAAATAACTTAAAGAGATCACTTCTTAACGTTGTATCCTTCGCCCTGAGGATCCA
AGATCCATGGATAGTTGTTAGGACACTCCATACAAGTGAAAAGACGTAATGTCTCTCCTG
GTAACTCTCTAGTTGTTAGTGGACAGGCGTTCGGCAGAGAACAGAAAGGTTGACCTTTGA
CGTCACATTTATCTTGTTTCCATTCTTGGAAGTCACGGAGTGATGATAATTCGGTAGGGT
TTTGCATCCATTGAATAACCTGAATTAGTGAAGTGAAGTATACATCGTTCTTTTCCAACA
TTTCTTCGATAAACTTAATTAATTCATCTCTGTATTCTTTTTTAGATTTAAGCCAGGAGG
CGTGGAAGTGGAAGCCTAAGGGAGCGCGGTTGGTTGTGTAATGACGGTTGAAGTTGTGTC
GGAGAAGACGTCCAAATTGTTCACCACTTTGGATGTTTGAACATGAGTCTACAACGTGGC
AACCTGGCAGAGATTCATCAAATGTGGGATCGTCCCTTCTGTCCAATTCATTCATGACCA
TTTCCCAAACGGGGTGACTTCTAGACGGACAGTTGTGGGCGTTGCCGTTACATTTATGTG
GCATGCGGAAATACAATGTGTAAGGCCATATCGGGACGCGTCCAAGAGGAGCAGTGATGG
ATGCATCATACACGAAGTATTGATCACCCATCATTTCGAATTGTTTGTTTCCACCGACAC
GTAAGTAAGGCGCCCGAACTCCAATTATAGAAGAGTCAGTGATATTTGCGTAACGTTCAA
TAATAAGACGAGCTCCGGCCATTTCAGCCAACCAATCATCGTACGAACCACTCGTCCAGT
ATTGCGGATCATCTTTATGAGTTATGGAAAATACAGAAATTTCATGTCCTTTGCGGTGTA
ATTCTTGTACAGCTGCATAGTTAGTATACTTGTGTGAGACGAAAAACGTTCCTTTAATTT
GACAACCGTTAGGATTATGACGATTACCGTTGAATATTTGTTCATATAAATCGATGTTGT
CAACATTCACAGCACCGTTAAATGTAATAGTAACCATTTGAGGTACTTGATTTGGTTCAA
TTCCACCTGGGATACGTGTACCGTCAGCAGAACAGAAACAGTCAGGTAGGACGCACTGGT
TAGGATCACAGTCAGGCGCTCTATTTGGGTCCAGTTCGACAGTGCAAGCATTTTCATCGG
ATTCATCTTTGCAGTCTGGTTTACCATTACAGAACAATTCTTTTTCAATGCAATCTCCGC
TGCCACAAGCCAATTTACCTTCAGGACAAATAGGTTCGTCCGTTTTCAAGATTGGTAAAA
CTTTTCGTGGCTTTTCTATTTGATCGCAATTCTTAACATTCGTTTTCCAATCACAAGTTT
GACGGTCGATATCGAAGGCGAGACCGCCGGGGCAGCGCACTGAGGCGAGCCTGGTGACGC
TGTTCTCTAGGCCCTGGTCGCACCTGACGACATCGCGGCAATCACCTTGGGTGGTGAGAC
GGAAATATTCATCGGCGGGTCTACCGTCGCACAACTGATCAGCGTTCGGCTCATCTCCAG
CTCCGTCGTCATCTTGTCGCTTCACACGAGAAGTACTGCATACCAGCGAACCAAGTAATA
ACACACCGAGACACAGAAACGCGTGTCGAGCCATG
(1895 bp)

- SilkBase 1999-2023 -