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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp14165_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106129230_[Amyelois_transitella]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:2.24 TPM:2.07
ORF Entry
Sequence
(Nucleotide)
CGTAGCTAGAATAGGAACTTTAAAATTTTTATGTGTTTCCTTTTTAGTTGTAAATTGTTG
AATTCCTTTTTAAAAATAATTAGAATCAATGTAGGGAAACAGGATTGTTGTTAAATTAAA
TATGGAATATCATTACTCCGAAATATGTAGGCCATCCGATCATCTAACAGATTACACACC
CCCTTTCATCATTCCCACGCATGAAGGGGAATATGAAGCGCGTAACAGTGTACTCGTGGA
TGGAGGAGAGAGATTTGGAGTTTCGGCAGTTGTGTTCGATAAACATGAAGAGTTGATATG
GATGGGGAATCAGGGTGGTCATGTAACATCCTACTACGGTCCAAATATGCAAAAGTACAC
ATCATTTCAAGTACACGATACTGATGAAGTTAGAGATATTATCACTGTTGAAAAATGTAT
TTATGTTTTGACCAAAACAACTCTACGCCATCAGTTACGTAGAGGTATACCTAAGCACAC
GCACAAATCACCAAACATGACAGACATGCAATGCCTGTATCAAGTGAACTCTACAAAATT
ATTGATGGGCGGACACCAAGACAAACTAATCGATTTGGACCTTAATAAAATGGTTGAAAC
TATCATTCCAATACAAGAGGAAGGCTGTGCGGTATTAAGAAGCGGTGGTAGCAGTCACGT
CGCTTGCGGTAGTGCTAACGGCATAGTGGCGTTGCGGGATATGCGTGCTCCTACAAAAGC
TGAGCATACATTCAGAGCACACACGGCTTGTCTATCTGATCTGGATATGCAAGGAGATCT
GTTGCTCACATGTGGATTTACTCAGGCCGTTGGAGGGGTAGTCGCAGAACCCTACATAGT
GGTCTGGGACGTCCGATGTCTACGCGGCAGTAACCCTGGGCAAGGAGGTTGGACCATTCA
TACCACATCACCGCCACTGCTACTTCACTTCCTGCCGGCGTTCTCTGGTAGGGCAGTAGC
TGCTTCGG
(968 bp)

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