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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp13111_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010793 P regulation of mRNA export from nucleus
GO:0016032 P viral process
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0042393 F histone binding
GO:0044822 F RNA binding
GO:0045191 P regulation of isotype switching
GO:0050684 P regulation of mRNA processing
GO:0051028 P mRNA transport
GO:0051147 P regulation of muscle cell differentiation
GO:0061086 P negative regulation of histone H3-K27 methylation
Transcript
Level		FPKM:3.44 TPM:3.18
ORF Entry
Sequence
(Nucleotide)
CGCGCTGTGCCGGCGTGCCGGATGGCGGCGGCTCCCGGAAATGTTCTTTGAACCATTTGA
GCAATCCCGAAAGAGAGTCGAACATCCGCTGCCGGAACTTGTACCCATCCGGCGACACGG
ACACGTACTCGTGCGTACACCGCGCCCGCGGCAAATAGGACAGTAGAAATCTCCCGGGAT
AGTTCTTCGAGGCCGAAATAACGTAATGAATTTTATTAGGGTTTTTGGCTTTCTCCTCCT
TGAGTATTTCTTCAGCTTTATCCCTGATCCCGCCGAGAGGCTTATAGTATTTGTACGCAA
TGAGATCTCGGGCGTGCCCCGCCATCGGTGTCACGTGACGAGCTATTATTTCATCCAAAT
CCTCAAATTCGGATCCCTGTATCCAAAGACTTCGACCTAATGAGAAAGCATTTTCTTTGC
CTTCCTCCCTCACGTCGATGTGTTGATAAATTCCATCAGTGACTTTCCATGTTACGGTCA
AATGGTCAGAACCCTTACTACTAGGCCTCACGATGACCTCTCCCTGTGCCATTTTGTCCA
TAAGCTTTTCAGCCTCCGCAAACGAAATATTGTGGAATGCCGGATGTACTATCACGCGTT
TTACGTACTGCATGCGATCCTTGTTCTGTTTTGCATCTTTTTCTTTGCGTATATCTTTGT
CTTCCGTTTCTTGGTCGTAGTAAGGGTCCTTTGGAGGTTTCCATTCATTATTCTTATCCA
GCAGGTCCGAAGACTTTGAAGTGCAGTCCACGGAGAAGCGTTCGACGTCGATCTTGATGA
CCCGGCAGTGCACGGTCTGCCCGATGCGGACCCTCTCGGTCGGATCCGTGACGTGGCGGT
CCGACAGGTTCTTGATGTGTATGTAACCGGACAGGCCGTTGTCCAGCCGGATCCGGACGC
CGGTCGCCTGGCCCGGGCACGCACCCGCGTCGAAATGGCTCCATACTTCGGACAGCTCAG
GAAAATCATTCTTGAAGCAAAACGGACACTGCCACAACCCCGTCTCGTCGTTTCTAACGG
GCGTCGCCTGGTCCAGCATCTCCCTCTGCGGTTTCCTATGCGTGATGCCGATCACAGACG
CTAAGACCATTTTCCCCACGTAAAACGTATCAGGTGACTCTTTTGTTAAAATGTCGAACA
GTTCCTCGGGCGTTGGCGAACGATACGACACCCTAAGATCCTTGTACCTAGAGTTCAATT
CCGCTCGAAT
(1210 bp)

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