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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12957_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_small_nuclear_ribonucleoprotein_G_[Plutella_xylostella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0005687 C U4 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0008380 P RNA splicing
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0034719 C SMN-Sm protein complex
GO:0043186 C P granule
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0097526 C spliceosomal tri-snRNP complex
Transcript
Level		FPKM:37.08 TPM:34.33
ORF Entry
Sequence
(Nucleotide)
GTCTCAGACGGTAGAATATAGTAGAAAAGTTAAATTCATTGACAAAATTCGATGGGTTGG
AAATTCATCTAATATACAAAAATCCACGACAATAACATTAATTCCGTATTATAATATTTT
AAAAAGCACATTACAATGTCAAAAGCACATCCACCAGAATTGAAAAAATTCATGGACAAA
AAATTGTCAATAAAGCTGAATGCGGGTCGCGCTGTTACCGGTGTGTTGCGCGGTTTTGAT
CCATTCATGAATTTAGTTCTTGATGAATCAGTCGAGGAGTGTAAAGACGGTCAGCGTAAC
AATGTTGGGATGGTGGTAATTCGTGGCAACAGTATTATAATGCTGGAATCTTTAGACAGA
CTTTAGTAGACTTACAGTGGGCAAGAAATATCACCAATGCTGTAAATGTGCTTCACGTTT
CATCAATAAATAAATATAAAACTCGGATCTAAAACATAGTTTCTACAGCAACAGCAGCAA
CAGTAAAAGGAAAAAAAAGGAAAACTGATAATTTTATATCTAAACTTCACTATTTAAATT
TAATGTGATGTTAGGTTAAGTTAATAAATAATAAAACACCTCAAAAAAAA
(590 bp)

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