| Name | A_BomaMG_comp12947_c0_seq1 |
| Scaffold_id | |
NCBI non-redundant
(nr) | Splicing_factor_3A_subunit_1_[Papilio_machaon] |
| Ontology |
| GO:0000381 |
P |
regulation of alternative mRNA splicing, via spliceosome |
| GO:0000389 |
P |
mRNA 3'-splice site recognition |
| GO:0000398 |
P |
mRNA splicing, via spliceosome |
| GO:0003723 |
F |
RNA binding |
| GO:0005515 |
F |
protein binding |
| GO:0005634 |
C |
nucleus |
| GO:0005654 |
C |
nucleoplasm |
| GO:0005681 |
C |
spliceosomal complex |
| GO:0005684 |
C |
U2-type spliceosomal complex |
| GO:0005686 |
C |
U2 snRNP |
| GO:0006396 |
P |
RNA processing |
| GO:0006397 |
P |
mRNA processing |
| GO:0008380 |
P |
RNA splicing |
| GO:0044822 |
F |
RNA binding |
| GO:0071004 |
C |
U2-type prespliceosome |
| GO:0071013 |
C |
catalytic step 2 spliceosome |
|
Transcript
Level | FPKM:5.92 TPM:5.48 |
| ORF Entry | |
Sequence
(Nucleotide) | GCGGCAGGGGCGCCTCGTCCGCGCGCGGGGCGTCCTGCTCCGTCTCGGACTCCGAAGTCG
AGCTTTCCTCTTCCATGTCTTGCACGCGGTTATCGTCCGGCCGATGGGACTGAGTTCGAT
CCTCCATTTCCGCAAGTTCCTCATCAGACTCCGATTCCGATTCGGATTCAATTTGCATCT
CAGTATCATCGTCGTCATTCTGGTTCCGTATTATATCTTCACCCCTCTCTTGGGCGAGGA
CGCGGGCTCCGACTTCTAGTGGAGTGGTCGGAGGAGGGAAGTCTCCGGGTTCCCCTGCGG
GGTAATCTACAGTTTCAACAACGACAAAATCGTGCCAGTCTATGGAGGCATACGCGAGCC
TCTCTTTCTCAATTTTGGCCTCGTCAGCGGCCTTACGCTTGGCCTGGTGCGCGTGCCAGG
CCGCGCGACTGCGAGCTTGTTCTAATATCCCGCTGCGTATCTCAGCATTCAGCTTTGATA
CTAGTTCTTTTGGCGGCAGCAACACCTTCGTGTACTGCTCAAGCAGACGCGTGAAGTATT
GGAACAGTGAATGCTGGGGACGAAGAAAATCAAACTGATGATTACGCTCCTCTTTCTTCA
TTAAATCTGTTAAAAACTGACGACCGTTTCTGGCGACAAATTGCGCGGTTAATTTCACTA
TGTCGAGCTCCAGAGCCGATATAGACGGTGGATCAGCGATAAATTCGAAATCTGGAGGTG
GGTCGCGCGGTGGGGGCAGTTCTGCAGGAGCAGCTGCCTTAAGGAGCTCCTGCTGGCGGG
CCGCTGTGGCTGGAGCGAGACCCATTCGTTGCTGTCCTGATGGCATAGTTGGTGGTGCAG
TTGGTTCGGGAACTTTTCCCTCTTTGATCTCTCTGACTTTATGCTGATAGTAAGCATGGT
AGGGATCCCCTGAATTAAGGAAGTTGAACTTTGGGTTGCCCAGCTCATTCTGTCTGATCC
TAGCTTCAAATTCAGGACCATTACGAGCCACAAAGCTGGCAGTTTTATCGACAATATTTC
TGACTTCAGGTGGTGGATAAATAATGCCAATGACTGGAGGGGGTGGTGGAGGCGGATCTT
CCGGGATCTCCAACGGCTGCCCCGGTGGTAGCATTACATCTATAGATGGCATTGTGCCTT
CCGTTTACAGCTACTCTCTCAGAAAAGTAGACGATGTTTACGCACTATGAACAACAATTT
ACAACAACAGCCCAAATGACGCTATAAA
(1228 bp) |
