SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12663_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_CWC22_homolog_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006909 P phagocytosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.80 TPM:4.44
ORF Entry
Sequence
(Nucleotide)
GTTTTATTAAGGTCAAGCTGGATTTTACTTAGTGCACGTTCTACTTTTTCATCGAAATAA
ATTTCATGATTTTACACATAATATTGAAAATGAATAGTTTTAATAATATTGAGTTCTAGA
TACAGTATTAAATTCTTTTATAAAAAGTTCAATTGTAGTTTAGTAGTGCCAAAACAAAAA
TCATAAGAATGGAGAAGACTAACACCAAGCAGAAGAAAGATAAATACGAGGAAGATGATG
AAAGGCGTAGGTCCAAAAGGCCGAGACGGGCTAGATCTAGATCTAAGTCACTTGAGGTAC
AGCAAAATAGGGAGTATAGAAGTAAACGCCGGCGTTCCAAATCACGCTCACCTCATTACA
AGGCTAGGGAAGATAAACGAGTTAAAGACACACAAAAAGAGCCAGAAACAAAAAAAGATG
CCTCTACAAAGCCAGAAAGACGCGCAAAAGATACTGATATGTTGAATACTAGAACAGGAG
GTGCATACATTCCACCAGCAAGACTGAGGATGATGCAGGCGCAGATCACGGATAAGTCCT
CGATAGCTTACCAAAGACTGGCCTGGGAAGCTCTCAAAAAGTCAATTCACGGTCACATCA
ACAAAATTAATGTCGGTAACATAGGTATCATTATAAAGGAATTATTGAAAGAAAACATTG
TCAGAGGTCGAGGTTTGTTATGCCGTTCTGTTATTCAAGCTCAGGCAGCCTCGCCAACAT
TCACTAATGTATACGCGGCTCTAGTATCAGCAGTTAATTCACGTTTTCCTAACATCGGGG
AGTTGCTGCTGAAAAGATTAGTGATTCAATTCAAAAGAGGTTTTAAACGCAATGATAAAT
CAATTTGCATTTCCTCTGCATCTTTCATTGCACATTTAGTGAATCAGAGAGTGGCACATG
AGATTCTGGCTTTAGAACTTCTCACTTTACTAGTTGAATCACCAACAGATGATTCAGTAG
AAGTAGCCATAGCATTCTTAAAGGAATGTGGCCAAAAATTGACTGAAGTATCATCTAAAG
GTGTAAATGCAATTTTCGAGATGCTAAGGAACATTTTGCATGAAGGTCAGTTAGACAAAA
GAGTTCAGTACATGATAGAAGTAATGTTCCAAGTTTGGAAGGATGGGTTCAAAGACCACC
CGGCACTGATTGAAGAGTTGGAGCTCGTGCCTGAAGAAGAACAGTTCACACATCTATTGA
TGCTGGATGACGCTACAGATCCTCAAGATATCCTGAATGTTTTCAAATTTGATGAAAAGT
ATGAAGAGAATGAACAGAAGTACAAGAATCTTTGCAAGGAAATACTCGGTTCTGATGCTG
AGTCCGGTGATGAAGATGGTTCCGGAGAAAGTGGCAGTGAGGAATCTGACGAAGAAGATG
AAGAACAACCAAAAAAAGAAATGACTATTATTGATAACACAGAAACAAACTTAGTGGCCC
TGAGACGCACTATATACCTGACAATTAACTCCAGTTTAGATTTTGAAGAATGTGCTCATA
AACTAATGAAGATGCAGCTAAAACCAGGACAAGAAGTGGAACTATGCCACATGTTCTTAG
ACTGCTGTGCTGAGCAGAGAACATATGAGAAATTCTATGGCTTATTGGCCCAAAGGTTTT
GCAACATCAACAGAATATACATCGGACCTTTCGAGGAAATTTTCAAAGATTCATATTCAA
CAGCACACAGGTTGGACACGAATAGACTCAGAAATGTCAGCAAGTTTTTCGCTCATCTGC
TGTTTACAGATTCCATTAGTTGGGAATCTTTGGAATGTGTTAAATTGAACGAAGAAGACA
CAACTAGTTCTAGTCGGATATACATAAAGATTCTGTTTCAAGAACTGGCTGAATACATGG
GACTAAAGAAATTGAATGACCGTCTACAAGATCCGACGTTACAAGAGGCGTTTGCCGGAC
TGTTTCCCCGCGACAACCCGAGAAACACGCGGTTCTCTATAAACTTCTTCACGTCCATCG
GACTTGGCGGATTGACTGATGAGTTACGCGAGCACCTCAAACAAATGCCCAAGAATACAC
CAGCGCCACCAACAGAGATCAAAATAGACAGTGACTCCAGCTCTGACTCCAGCTCAGACT
CGTCTTCTTCAAGTGATTCCAGCTCAAGCGAATCTGAGGAAGAAACACAGAAAAATAAGA
AAGAAAAGAATAAAAACAAGGAAAAATCACCAGAACCAGAAAAACCCCAAGACAATAATG
TCGAGCGGTGGGGACATGAGGGGTTCTACGATACTTACGGGAGGGACGCGCGGCGACACG
ACCCTCGTGACCGCGGCGACGGG
(2303 bp)

- SilkBase 1999-2023 -