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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12662_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
Transcript
Level		FPKM:37.21 TPM:34.45
ORF Entry
Sequence
(Nucleotide)
GTGACAGGTGCGTGACATACTGTGACTAATTTCAGGGAATGTGAAAAATTATTTACTCAG
GATATCATTTAATAAATTTAAAAAAATACTAAAATTTTCTGTATACATTCAGATTTTCGT
GTACGTGTATTTATGTGCCTTCTGCGCTAGATTTCAATAAGTAATGTGATAAAGAGAATG
TGGCGTTATTTACGTTTCCTTTCACAGTGATAAGAATACGATAATAAGATAATTCGAAGG
ATTCTTAGCTTCGGACGAACTCGCTTCATATGAAATGTGCATTATTAAGATGAGACCACA
GCCTAAATAAAACAATATTATGCTTCATTCAAAAGGTTTAACTAAGAGCATACACTATGA
ATGAAAATATATCTTCACTCACTGCTCCAATTTCTGTGTCCACATATCATCAACTGAGCT
TAACAGTGGAATCAGCAAATATAAAAAATTCAGGCTTGTTCAAACCAAATCCATACCTGC
AAGTTATAATTGATGATAAAATATTGAGAAAGACTGAAGTTATAAGGAACACCTTGCATC
CAAAATGGAAAGAAGATCTTACTATTTTGGTGACGCCACAATCGCAATTACTGTTCCGTC
TCGCAGATTATCATAGCTTTAGGAAAGACAATGTGATTGGTGAAAAAAAAGTGAATCTAT
TAAAAGTTTTGTTTTACTGTAATGGGAAATGTGAGAATTTAGAACTTACATTAGATTTAA
TGAAAACATCTTCTCAAGAAAATACTACTGGAAATGCTGAGGTAAAAACAGCAGAACTGG
TGTTGCTTCTAGATGGCTTAAGAATTGACCCTGGAGTGTTGACACAAACACGTGAATTAC
TTGGTGAAACGGTAAATACTGCAGTTCCCCTTAATGAAGGGGTGCGAGCCAGAATCAGAA
TGCGCAACAATCCTGAGACTGTTAGATCCATGATGCGATCACTAACACTTGGACCACCTC
CAGGACCTCCACCAATGAGCAATGGGTCTATACATTTACCGAGTACTGCAACACAGTCAT
CATCAGAAACTGCAGGCCCCTCACAGCAGTCACGCCTGCCTGGTACACAGGATCCAACAT
CAACACAGCCAACATCTGCTAATACTGCTTACCCTAATGCTGCTGAGGAGCCTTTGCCTC
CTGGGTGGGAAATGAGATATGATGGTTATGGTAGACGGTACTATGTCGATCACAACACTC
GGTCCACATCGTGGGAACGTCCGCAACCGTTGCCGGCAGGTTGGGAGGTACGGCGCGACG
CTCGCGGGCGCGTGTACTACGTGGACCACAACACGCGCACGACCACGTGGCAGCGCCCCG
ACACCGAGCGGCTGGCGCGCTTCCAGCACTGGCGTGGCGAGCGGCGCCACGTGGTCGCGC
AGGGCAACCAGCGCTTCCTCTACCCGCACGTGCAGCCGACGCACCAGCCCGACGGAGCCG
AACACGAATCACAAACAGGAGTGGCGGGCGCAGGTGGTGGGTCCACTCCTGCCCCGGATG
ACGGTCTGGGCGCACTGCCCGCCGGGTGGGAGCGTCGTGTGCAGCCCGACGGACGCGTAT
ACTACGTTAACCACAAGAACCGCACCACACAATGGGAGGACCCACGAACCCAGGGGCAAG
AGGTGAGCGGCGTGGAAGAAGTTCTGCCAGCGGGCTGGGAGATCCGCTTCACAGAGGAAG
GCACGCGGTACTTCGTGGACCACAACACGCGCACCACCACGTTCCAGGACCCGCGGCCGG
GCGCGCCGCAGGGCCCGCAGGGAGCGTACGGCGTGCCCCGCGCCTACGAACGATCCTTCC
GCTGGAAGCTCAGCCAGTTCCGTTATCTCTGCCAGAGTAACGCGCTACCCAGCCACATCA
AGATTACACTCTCGCGGCAGACACTCTTCGAAGACTCCTACCATCAGATAATGAGGCTAC
CTGCTTACGAACTCCGCCGACGGCTTTACATAATATTCCGCGGAGAGGAAGGGCTGGACT
ACGGTGGAGTCAGTCGAGAGTGGTTTTTCCTTTTGTCGCACGAAGTTTTGAATCCCATGT
ACTGTCTGTTCGAGTACGCGAACAAGAACAACTACAGCCTCCAGATCAATCCCGCCAGCT
ACGTGAACCCCGACCATCTGCTGTATTTTAAATTTATCGGAAGATTTATAGCGATGGCAC
TGTATCATGGCAGATTCATATATTCCGGGTTCACGATGCCCTTCTACAAGCGAATGTTGA
ATAAGAAGTTGACGATGAAAGATATCGAGTCGATCGACCCAGAGTTCTACAACTCGCTTG
TATGGATCAAGGACAACAACATCGACGACTGCGGTCTTGAGATGTGGTACAGCGTTGATT
TTGAGGTTCTCGGTCAAGTCATACACCACGAACTGAAACCGGGCGGCGACAAGGAACGCG
TTACTGAAATAAATAAAGAACAGTATTTACAACTAGTCACACAATGGCGCATGACGAGGG
GCATCGAAGAACAAACAACGGCCTTCCTCGATGGTTTTAATGAGGTGGTGCCCCTCGAGT
GGTTGAAGTACTTCGACGAACGCGAATTGGAATTGATGCTGTGCGGCATGCAGGAGGTCG
ATGTCGACGACTGGCAACGGAACACGATTTATAGACATTACACGCGGACCAGCAAACAAG
TTATGTGGTTTTGGCAGTTTGTAAGGCAAATGGATAATGAAAAACGAGCACGATTACTTC
AGTTTGTGACGGGTACATGCAGAGTTCCAGTAGGTGGCTTTGCGGAATTAATGGGCTCTA
ATGGACCCCAAAGATTTTGTATAGAAAAGGTTGGCAAAGACACATGGCTGCCGCGGTCGC
ATACTTGTTTCAACAGACTCGACCTCCCTCCGTATAAAAGTTACGAACAGCTGTGCGAGA
AACTGAACTACGCAATAGAAGAAACTGAAGGATTTGGACAAGAATGATTTAATTGTATAA
ATGATGTTAGATAATATAGTGGATAATGTAAATTATTGTCACATTGAAATTACTCTGCAC
CAGCTCGTCAATAAAAATATCATTCACCAATGGAATTGGTGCTGGTAATAAAAGACCAAC
CAAATAATTATTACATATTTTATGAATATTTTGTAACAATACTTAGCTGTCATATAATTT
TATGTAGATATCATTAGTATTTTATCAGTTGTGTAAGATATATTTGTTTTTAAACTATAA
TATTTAAACAATGTTCGTTTACGAAGTTCAATAAATAATTATTAAAA
(3227 bp)

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