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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12456_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		small_nuclear_ribonucleoprotein_polypeptide_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0005687 C U4 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0007281 P germ cell development
GO:0008380 P RNA splicing
GO:0008406 P gonad development
GO:0015030 C Cajal body
GO:0016070 P RNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0045495 C pole plasm
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:26.81 TPM:24.82
ORF Entry
Sequence
(Nucleotide)
GTTTTGCTGCGTCCCGCGTCGCGCCTTCAGCTTTTGTATCCTACTCTGCGCGTCTCTGTG
TACTGCATAGATTATACACTTAATGGTGTACTGTGCTCAAGGCTCAAAGGCAACTGTCAA
GTGAATATCGCTGAAGCAAATTGAAGCTTTCCATATATCTAATAATATCTTCCTAATCAC
TCCGATAAAATGACGATCGGCAAAAACAATAAGATGCAACAGCATATTAATTATAGAGTA
AGGGTTATATTACAAGACTCTCGTACATTTATTGGAACTTTTAAAGCTTTTGATAAACAC
ATGAATTTAATATTAGGTGATTGCGAAGAATTCAGAAAAATTAAATCTAAAAATAGTAAA
ACTGCAGACAGAGAAGAAAAAAGAACTTTGGGTTTTGTTCTTTTACGTGGAGAAAATATA
GTTTCATTAACAATCGAAGGACCTCCTCCACCAGAAGAAGGATTGCCTCGTGTTCCCTTA
CCGGGAGCTATGGGCGGGCCTGGAAGTGCTCGTGCTGCTGGTAGAGGCACTGGCCCGGGC
GGAGTACCTCCGGGTCTTCAAGGTCCTGCCAGAGGAGTAGGCGGGCCATCTCAACAACAC
ATGGCACCAGGAAATCGTGGTCAACTTTCTGCTCCTCCTCAAATGCGAGGAGGCCCCATG
ATGGGTGGCCCTCCTCCAGGAATGATGGGAGCTCCTCCTGGCATGGGTCGTGGTGGGCCA
GGACGGGGTCCTCCAGGAATGCGACGCTATTAGTTTAAGTGCAGTGCAGTGATTTGTGAT
TTATATTATTAAAAACAGTGCTGTATCAAAAGTTGAGAATATCCTCTGATTTTGTGTATG
AAACATGAAATTTGTACTATGGTGGACATGCTGTCTTGTAAAGTGAGTCCAGGTCAAAAT
AAACAAACTACTGATTTAAAAAAAAAAAA
(929 bp)

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