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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12297_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		ATP-binding_cassette_sub-family_B_member_1_[Trichoplusia_ni]
Ontology
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0002481 P antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
GO:0002485 P antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0002489 P antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0002591 P positive regulation of antigen processing and presentation of peptide antigen via MHC class I
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0009986 C cell surface
GO:0015893 P xenobiotic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042623 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0046581 C intercellular canaliculus
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:0072089 P stem cell proliferation
Transcript
Level		FPKM:47.85 TPM:44.31
ORF Entry
Sequence
(Nucleotide)
GATTTTTTCGCTTGTTTATCACAATGATAAATTGTAGTACTATCTGTAGTAGATAAGTAC
TATCATGTAGACTAGTCTATTCACGCTCGGCTCAGTCGAGTATTGGGTTTGAAAATTTTG
TTATCAACCTCCGTAGAGCATTTTGTTTATACATAGTCTCTAAGGACTGAGTTTAATCAA
CGTTTATATAGTTGCTTCGTGATCATGAAGGAAATCAAAGAAGACAATTGGGATCCTGGC
CTAGGCGGTGACAAAAACAAATATAAAGTCAGCGGTTTCTCTGATGGCGATCATCAAAAA
AGAAAGCAATCTGATAGTTCCGAAAAAAACGCCAAAGATGATGTACCGAGCATATCATTT
TTCACACTGTTTCGTTTCGCCACTACAACAGATGTTTTGTATATTATCATAGCCCTGGTA
TCATCGGCTGTGGCAGCCTGTTCCACGCCATTAAATACTTTGCTATTAGCCGATTTACTG
CAAAGCATGGTGGATTTTGGCATCTCCGTAGTTCAAGAGAATCCAAATGGAGACGCATTC
TTGGAATCACTTTTCTACTTCGCCTTGTATAATTCTATCATAGGCATACTGTTGGTCATT
TTCACTTATATCGCAACGGTACTAATGAATATCGCTGCATATAATCAGGTATATAAAATA
AGACAAGAATATCTCAAAGCAGCTTTGAATCAAGATTTTGAGTATTTCGATATCCATAAA
ACTGGGGATATAGCTACCAAGATAAACAGCGATATACTGAAATTAGAAGATGGCATTGGT
GAAAAGCTGGCCACTTTCATATTTTACCAGTGCTCATTCATCAGTTCAATTATCATGGCG
CTTATAAAAGGCTGGAAGCTGGCCCTCCTTTGTCTGATATCATTTCCGGTTACAATGACA
CTTGTTGGAGTAGCTGGACTGGTGGCTTCAAGGCTATCAAAGAAAGAAGCAATAGCGTCC
GGTAAGGCTGGAGCCATCGCCGAAGAAGTGTTGTCATCTATTAGAACAGTGTACGCGTTT
ACGGGCATGCAGAAGGAAATCGAACGATATGAAAAATACCTTATAGAGGCGAGAAAGATC
AATATTCAGAAAGGTCTTTTCAACGGTCTCGCTATGGGCTTCCTTTTCTTTTGTATATTC
TGTGCGTATGCATTATCCTTCTGGTTCGGCTACAGACTTATGGTTGACGAACCAGAGAAT
TATGATGTATCAACAATGATCGCAGTTTTCTTTGGTGTAATGACCGGATCCGCTAATTTC
GGTGTATCATCAACCCTAATGGAAGTGTTCGGTGGAGCCCGCGGTGCGGGTGCTCAAATC
TTTAATTTAATTGATAATGTACCAGTAATTAACCCATTGCGGAATCTCGGAGTCACGCCG
CCATCCATTGATGGTAACATCGAGCTAAAAGATGTTGTATTTCATTACCCTTCTAGACCT
GATGTACCAGTACTCAAAGGCGTAAACCTAAGGGTGAAAAGAGGGCAATCTGTCGCGCTT
GTTGGACATTCGGGATGTGGAAAGTCAACGATCATACAACTCATATCTAGATATTATGAT
GTTATAGACGGAAATGTGTGCATTGATGGCAATGATGTTCGTCAACTGTCTGTTCGTTGG
CTTCGGTCTCAGATTGGTCTGGTCGGTCAAGAGCCTGCGCTTTTTAACATGACAGTTCGC
CAAAACATTCGCTTCGGTCGCGAGGAAGCTACAGATCAAGACATCGAAGCAGCAGCAAAG
CAGGCAAATGCTCACGAATTCATCATGAAACTTCCCAATGGCTACAATACGCTGGTTGGT
GAAAGAGGGGCTTCGATATCTGGTGGACAAAAGCAAAGGATTGCTATAGCGCGTGCTTTA
GTCAGAAATCCTCCTATTCTCCTCCTAGACGAAGCGACGAGCGCTCTAGATACGTCATCT
GAAGCCAAAGTACAAAAGGCTTTAGATAAAGCCCAAGAAGGTCGCACAACAATTGTAGTG
GCGCACAGACTTTCAACTATCAGAAACGTTGATGTTATTTACGTTTTCAAAGAGGGCTCT
GTAATTGAGACTGGCAACCACGATGAACTGATGAAGTTAAAAGGACATTACTACGATATG
GTTATGCTGCAAACGTTCCCTGGAAGTGAGGAGGACGACGACAATAACGGAGACAACGAA
AGTCGGCTGTCTCGAAAAATATCTAATATGAATATAAACGATGATGACGACATTATAGAT
ATAAAAAATTATGGTGTTGAGGAACACAGTGACGTTCCAACTGATGTGTCATTCTGGAGA
GTAGTCCGCTTAAATTCGCCAGAATGGAAATCCGTTTCTCTAGCCAGTTTTTGCGCTTTT
CTTAGTGGATTTGCCATGCCTCTCATCGCAGTAATCTTTGGTGATTTTATTGGGATACTT
TCAAATCCAGACGAAGAAAAAGTTTTAGCAGAGGTACAACGTTTCGCGTTGATATTCGTT
GGCATAGGCTTATATTCTGGCGTTGCTAATTTCACCATGGTATTTTTGTACGCCATCGCT
GGGGAACATCTAACGGAACGTTTGAGAAAGATGATGTTTGAAAAACTCCTTCAACAAGAA
GTCGCATTTTATGACGACAAGAACAACACAACTGGAGCACTGTGCGCTAGATTGTCGGGT
GAAGCAGCTGCTGTACAAGGGGCCACAGGGCAGCGTATCGGTACTGTATTGCAAGCAATC
GGGACATTTGGTTTTGCTCTGGTACTTTCCTTAGTGTACGAATGGCGAGTGGGTCTAGTT
GCTTTAACGTTTATTCCAATATTGGTTTTTGTACTGTATAAAGAAGTAAGGATGGCCTAC
GCGGAATCCTTCGGAACTGCGAAGACAATGGAAGCTAGCTCAAAGACTGCGGTAGAGGCA
GTGGCTAATGTACGAACAGTAGCCTCGCTGGGTGGAGAAACGAAAATCTTACAAGACTAT
ATAATACAGTTATTGCCAGCACTTTTGTCAGCAAAGCGTGCTTCGCATTGGCGTGGTGTT
GTCTTTGGACTTTCAAGATCTTTATTTAACTTCGTTATTGCTGCATCTCTGTACTACGGT
GGTACTCTTATAGTGTATGAACAAATCGAATATGAAGTTGTATTTAAGTCAGCCCAAGCT
CTTCTCTTAGGTGCTTCATCTGCAGCACAGGCTTTCGCTTTTGCGCCCAATTTCCAAAAG
GGAATCAAGGCAGCAGGACGAGTTGTTTCATTGCTAAACAGAGAGTCTAAAATTACCGAT
CCCCACGAACCAGTAACCAAGGACTTCTGTGGATCAGGTGAAGCGAGCATTCAAGCGGTT
CAGTTTAAATACCCGAATCGTCCAGCCATACAGGTGCTTAAGAATTTCAACCTGGAAATT
GAAAAGGGAAAAACATTTGCACTCGTCGGCAGTAGTGGCTGTGGTAAAAGTACTGTCATT
CAACTTCTTCAAAGGTTCTATGATCCTGACGACGGCATTGTGGCTCAAGATGGTATTCCT
CTACCGAAGCTTACACTTGCAAACGCAAGACAATCAATAGGTTTCGTACAACAAGAACCA
GTTCTGTTTGATAGAACTATCGGGGAGAACATAGCATACGGAAATAATGCAAAGAAAGTC
AACATGGATGACATTATCGAGGCTGCAAAGCAAGCCAATATACATAACTTCATAACTTCG
CTGCCTTTGGGTTACGAGACGAACATCGGGACTAAAGGCACTCAACTGTCTGGTGGACAG
AAGCAAAGAATAGCTATAGCCAGAGCTTTGATAAGACGACCGAAAATGCTGTTGCTTGAT
GAAGCGACTAGCGCATTGGATACAGAGAGCGAGAAGGTTGTCCAGGAAGCGTTGGACGCT
GCTAAAGCTGGTCGAACTTGCGTGATGATTGCCCACAGACTAAGCACCGTGCGTGATGCG
GACAGCATTTGTGTTGTAAGCGACGGGAGAATAGCCGAGAAAGGGAAACACCACGAACTA
TTAGAACTTAAGGGCTTATACTATAATTTAAATAGACGGGCGCATTCATAGAAATCGCAG
CGATCAATACTTATCATAGTACTCATAAAACAAATAAAAAATATGACCAAAGAGTTTTTT
TGTTTTTTGCGAAAGCGGTTATGTCGTTCTATTTTAGTAATGTAATTTTTATATCATTTT
AATTTTATCTACACAAATGTTTGACGCTCGTGAAGAGGAGTTTAATTTGGAAAATGTGAA
AGGTCTGCTATATTTTCAATTATGTATTCCTGTGAATTTATTTACAGTCCATTTTTTTTT
TTGAGAAACATTCCTACCTCTGTACTTTGATTGAAAAATGAAGAACTTGTATTTGTTTTG
ACAGAAGATAATCTACTATCTGATGATTATATAAATTAGTCCCACATAACTATTGAATCA
CCAATCTAGGTAATTCTTTTGTGTTTGAAATTGTCTTAATTTGTTACATATCAATATGTA
TTTGTTTATTATTAGTATTTTATTTGATACCCAATTGTTTTTATGACGTTACGTAATTTA
TTTAAGAATAAAATATAGACGTAAAAA
(4527 bp)

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