SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12223_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TM2_domain-containing_protein_almondex_[Amyelois_transitella]
Ontology
GO:0001713 P ectodermal cell fate determination
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007498 P mesoderm development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0044214 C spanning component of plasma membrane
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
Transcript
Level		FPKM:1.44 TPM:1.33
ORF Entry
Sequence
(Nucleotide)
TTCAGACTTTTATTGAGGAAAATTACATTAATGTAGCAACATTAAATTAAATCTAAGTTA
TATATATAAAGACCCATCAGCTGGTCCTAAATGGTGTATTCCAATTAACAATGCATCCAC
TAAGGTCCACACTCCAAGGCCACCAAAACTAAAAAGTTTACCAATGCCTTCTTGCCAGTG
ACCAAGATAAAAGCGGTCAGCTCCAAAACCTCCTAAAGTTAATGCCAGAACAAGTGCTGT
ACCCCAACGAGTCCCTGATGTCCAGGAGCATCTTACTTTCTTAAGGAACCGCCTCTTCCC
CAAACATATAACATCATCAGATACAGTGCAATTAGTTAGATAGTATTTGAGAGGTGAAGC
TAAAGAATTACAATTTGCCTTTTGTTCACAACGATGTTCCCATTTATCAGTTTGATAGCA
AAATCTACACATTGAGCTTTTGTTGAAAGTTTTTAACCCTTGACAAACTACTTTTGGTTT
CACTGTACATGTATAATTATAGAAACCTCCATATCTGCAATCTATACTCCGGTTACATGT
TATACAAGGGTAGAGTAAAGAAGAACATTCAGTCATATTCTCTTGATCAACTGATGGACA
ACTTTTTATGTATTCTTCATTCTCACCATATCGGTGACATGTATTGTGTTCATTATTACT
AATAAAATCAAAATAAAACAGTCTCGAATGCTTATACGTAAAGGCAGAGTTCTATGCATG
TTGGAAATCAAAGCATTTCTTCTTCCATAGAATATAGGTATCTTACAAATGCTCTTTAAA
ATGTTATGATTTACGAATAGATATAATATATTACATTTTCCATCTCAACAATAGCAAATT
TCACGTATG
(849 bp)

- SilkBase 1999-2023 -