SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12143_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_general_transcription_factor_IIF_subunit_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:0.99 TPM:0.91
ORF Entry
Sequence
(Nucleotide)
GTTTGCGATTAGCGTTGTTTTAATTGATTACAATATTTTGAATCAAAGAGTAAACTGTAA
CGTAATAAATTATTTGATTTGAAGAAATTTAACGTGTACGTTAGTGAGATCATGATATCG
AGGACTATTGTCATTTGATAAATTTATATACCGTCATTAATCTTGATATTATAGATATAA
GTAAGTGTAAAAAATGTCTACACCTGGAAGTAGTACGACACCGGCCGCCACAGTACAGGA
GTATAAAATAAGAGTGCCAAAGAATGTAAAGAAGAAGTATCATGTTATGAGGTTCAATGC
CACATTGAATGTAGATTTTGCAAAATGGACTCATGTCAAGATGGAGCGAGAGAACAACAG
CAAAGAATTCAAAGGAGCTGAAGAGGAAATGCCCAAGCTCGGAATACGGACGGGACATGC
GTGAGGAAGCACGTCGCAAGAAATTCGGTATAATATCAAGAAAGTACAAACCGGAAGACC
AGCCGTGGATCCTGAAAGTCGGTGGAAAGACCGGCAAGAAATTCAAAGGTATTCGTGAAG
GTGGAGTATCAGAGAATGCTGCGTATTATGTGTTCACTCACGCAGCGGATGGCGCAATAG
ACGCCTATCCACTCCAGGAATGGTACAATTTCCAACCGATTCAGAGATACAAAGCACTGT
CTGCTGAAGAAGCGGAACAGGAATTTGGCAGGCGTAACAAGGTTATGAATTTCTTCTCGT
TGATGTTACGGAAACGGCTCCGCGGAGTCGACGATGCAGACGAAGAGGACCCAGACGAAA
AGAAAGCTAAAGGGAAAGCTAAAAAAGACCTCAAGATATCCGAGATGGACGAATGGATAG
ACTCTGACGACGCTTCCTCGGACTCCGGTGCTGGTGAAAAAGAAAAGGAAGAGGACAGTG
ACTCCGGGGCTAAAAAGAAGAAAAAGGGTAAAGGTCCGCCCCCCAAGAAGAAGCGGAAAG
TTAATGACGAAGCGTTCGAAGAGAGCGACGACGGGGACGAGGAGGGTCGGGAGAAGGACT
ACGTGTCCGACTCCTCGGAGAGCGAATCGGATCACGAAACTAAAACTAATAAGGAACTCA
AAGGAGTGGCAGAAGAAGACGCGCTCAGGAAACTGCTTACTTCCGACGAAGATTCCGAAG
AGGAGCAGGAGCAGAAACAGGAATCAGAACACGAGGACGAGCCCACCAAGGAAGGCGAAG
AGAGAGCCAGCAAGCTCACCAAGAAAAAGAAGAAAACTGACGAAACTAAAAAAGATTCGA
GCAGCGACTTCAGTTCGGACTCTGACACGGAGCCCGAGGCTGGCAACACAAAGAAGCCGA
AGAAGAGTAAGAACGCCGACAAGAACGCGGCCACCGGCGCCTCGGGAGCAGCGGGCGGCG
GCGGGGCGG
(1389 bp)

- SilkBase 1999-2023 -