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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp119279_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:2.86 TPM:2.65
ORF Entry
Sequence
(Nucleotide)
GTTGGACGTTTTTTGTTTTTATTTCTCGTGAAAAAGAAAAATGGTATTCGCTCATTTTAA
TATAGATTTTGTGATTTCGTATTAAATATTCAATAGTTTGTTGTATTTATCATTAATCTG
TGAACAAGAATGTTTTTATAGAGATCATTGCAGTTCGATGTGCTGTGATGAAATGTCAAA
ATTTTCGTGGATTAGTGCCAGAGAAAATTCGATTTCATGAAAAATTGTGAATTAGACATA
ATCACGGATTACGACAAATTACTATTTTTTTTCTAGTGTTTTAATTCTATTTACCTAACA
GTGCAACATTTATGTTTGATGATTGTGCACATTTCACACTGAAGGGTCCATAACGACTGG
TGAGAAGTGGAGATGAGTACTCCACCGCCAGTGCAGCTGGAGGTCGAGGTTGGTGATGGC
TCAATGGATGACGAGACCCCCGACATGATACCCGCCGACAGGTACACGTTGCCGGCTCGT
GCTGATGCTGTAGTGGAACTATGGCGGAAAAATCTGCAGGAGGGTGTACTGGCGCCCTCG
CACTTTCAAGATCATTGGCGCGTCACCGTTCCGAGAATATATTCGCCACAACCCAACAGA
ACATGTTTGGACTGGTCTTTCGACGAGGAACTAGCTGCCAAATTGCTCATCCAACCCCTA
GAACAGTTCATATGGGGTACAACAGAAGGATCTCAACCGGGTCCCCCTCGTCGCTCTACA
CTCTGCGGGCGGGTGTTCAAACAAGGCGAACCTGCATATAGTTGCAGAGAATGTGGCATG
GACAACACTTGCGTACTCTGCGTGGAGTGCTTCAAGGTATCAGCTCATAGACACCACAAG
TACAAGATGGGGCAGTCCGGTGGCGGCGGCTGCTGTGACTGCGGTGACGCTGAGGCCTGG
AAACGGGATCCATTCTGTGATTTGCATGCTGCTCCAAGCGATCAACCGCCCGAGGCAGGC
ATAAGCGAGGATGTTATAAGAAGAATGAAGATCGTAGCATCAGCTTGTTTGACTTATTGT
CTAAGGCTGCTTACACACGATCACGCTCCATGCTTGCCGAACGATCTCAGATTGAAAGAC
ACAGAGCGCGACATCCTGCAGATACTGGACCAGCCGGATTGCTACTGCACGGTGCTCTAC
AACGACGAAACTCACACCTTCGAGCAGGTGATAACAACATTGATACGCGTGACGAAGTGC
AACCACCGCGACTCCGTGGAGCTGGTGAGCCTCATCGACCGCGAGGGCCGGGCGCTCATC
AAGTGCAACTCGTTCCAGGTCTGCGACAAACTCAAAACTGACATCGAGATGTTCACGGCG
CGCCAGAGCTCCACGCTGAAGGTGCTGGTCATGCACGCGCACGTCATCGCGCACCAGACC
TTCGCCATGAAGCTGCTCACCTGGCTTCAGAACTTCGTAAGCCAAGAGCAGAGTCTGCGC
ATGGCCGTGTCCCACGTGGCGCTGGGCGAGGACATGTGGGGCTCGAGCACGGCGTG
(1496 bp)

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