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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11488_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_TFIIH_basal_transcription_factor_complex_p52_subunit_[Danaus_plexippus]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:2.78 TPM:2.57
ORF Entry
Sequence
(Nucleotide)
GTTTTGAATTTGGATTACTTTGATATTTTAATCTGAAACTTATGAATTAAAGAGATTTAA
GAACTAATTAATAGGTAGACATCAGACAGCGAGAACGATGACAGAGTCATCTAAATCGAA
GTCTTTAAATTTGAATCCTTCGCCTACACTACAATGCAAAGATCTTCACGAATATCTTAA
GTCGCGGTCTCCGCAGTTTCTAGAGACTCTTTACAATTACCCCACTATATGTCTAGCTGT
GTATCGCGAATTACCAGAGCTAGCACGTCACTTCGTAATCCGCTTGCTGTTCGTTGAGCA
GCCAGTCCCACAGGCAGTTGTCACATCCTGGGTCTCGCAGACATATGCCAAAGAACAAGC
AAAAGCATGCACTACACTGTCAGAGCTCTCCGTGTGGCAGGAGGCCCCCATACCGGGGGG
CATGCCGGGCTGGATGCTCGCACAGTCGTTTAAAAAGAACCTCAAAGTGTCATTGCTTGG
GGGAGGCAGGGCGTGGAGCATGTCGTCGTCGCTGGAGCCGGACGGGAAGGCCCGGGACGT
GTCGTTCCTGGACGCGTACGCGCTGGAGCGCTGGGAGCGCATGCTGCACTACATGG
(596 bp)

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