SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11380_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tyrosine--tRNA_ligase,_mitochondrial_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004831 F tyrosine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006437 P tyrosyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070184 P mitochondrial tyrosyl-tRNA aminoacylation
Transcript
Level		FPKM:3.37 TPM:3.12
ORF Entry
Sequence
(Nucleotide)
GTCACAACCTGTTTAATATCACAAATTCACAACAATAAATTTAATTTAAGAAAAAGATAG
GTACATAAATGAACGGCACAAGTGAAATATATATTGGAGTTTAATCGAGGCTCGCCCCAT
TGCAGCTATTTGTTGTATTTCGTAGGTACTGTTAGTGAAGGTGTACAATCGCATTTTAAA
GAAATAATTAGGTTAGGCCGATAGGTACAGCCACAAAATTAAGATGATTTTAAAACGATT
AATAAATCACCAAGTTACATACTGGACCTTCAAAAGGTCTTATGTCAGTAGAAATATTTT
AAAATTAAGTGAACGCGGAATGTATCAAGATTTGTTTCCGAACACTGCGGGAAAAGAAAT
ATTAAATTTGTTGAACAAAGCCCCACAATGTGTTTATGCTGGTTTTGATCCAACAGCTGA
TAGCCTTCATGTTGGGAATCTACTGGTAATAATAAATCTACTCCATTGGTACAGAGGAGG
ACACCAAGTCATTGCATTGTTAGGGGGGGCAACTGGGCATATTGGTGACCCGAGTGGAAG
AAACACTGATCGTGCAGCATTACAAAAAGAAGTTATAGAAAAAAATATAAAATGTATCAG
GAACAACTTGGAAACTATATTTGAAAATCACAATAAATACATCTCATCCAAAGATGATGG
ACCACCAAAATCACTAAGAATAGTCAATAATGAAGAATGGTATAGAAAAATAGATTCAAT
ACAGTTTGTAAGCGAAATAGGTCGTAATTTTCGGATGGGTACAATGCTGTTGAAACACAG
TGTTCAATCTAGAATCAATTCTGAAGTTGGCATGAGTTTCACGGAATTTAGCTATCAGAT
ATTTCAGTCATATGATTGGTTACATTTACTAAAAGAATATGACTGTAGGTTTCAGGTAGG
TGGCAGTGATCAGATGGGTAATATCACAGCTGGCCATGAATTAATAAGTAGAACTGCAAA
GACAGATGTTTATGGTTTAACATTGCCATTAGTAACAACAGATGAAGGGGATAAGTTTGG
AAAGTCTGCAGGAAATGCATTGTGGTTGGATTCAGCAAAAACAAGTCCATTTAGTTTGTA
TCAATATTTCATTCGAACCAAAGATGCTGATGTAGAGCGACTGTTGAAGTTATTTACTTT
CTACAGTTTAGGAGAGATCAAAGATCATGTATAAACATGAACAGCATCCGGATCAAAGGT
ATCCACAGCAGTGTCTGGCTGAGCAGCTAACGACTCTGGTGCATGGAAAAGATGGATTAG
CCCAAGCACAAAGAGCAACATCTGCTATTTACAGTAAGGATATTAAATCATTAGTCTCGT
TGAAGAGTGACGAGTTGGAAAAAGTTTTCGAAGGTGCTCCCGTTACTAGTTTACTATTAT
CACCTGGAATAACTGTTTTAGAACTTGGAATGAAAGCTAAATGCTTCCCGACTGAGAATG
ATGCCATGAGAATTATAGAAGCCGGTGGATTCTACATCAATCACCAGAAAATTAAGAAAA
TTGATGAGGTCATAACACAATCAGCACACATACTACCAAATCTAATATCACTCTTAAGGA
CTGGGAAACGTAATTATTATATTGTGAAATGGCAAACATAATAATTGTTTATTTTGATTT
TCTGAGAATAAAACCAAT
(1638 bp)

- SilkBase 1999-2023 -