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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11311_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0001709 P cell fate determination
GO:0001889 P liver development
GO:0001890 P placenta development
GO:0001947 P heart looping
GO:0002011 P morphogenesis of an epithelial sheet
GO:0002315 P marginal zone B cell differentiation
GO:0002437 P inflammatory response to antigenic stimulus
GO:0003184 P pulmonary valve morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006959 P humoral immune response
GO:0007050 P regulation of cell cycle
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009887 P animal organ morphogenesis
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0019899 F enzyme binding
GO:0030154 P cell differentiation
GO:0030326 P embryonic limb morphogenesis
GO:0030513 P positive regulation of BMP signaling pathway
GO:0035264 P multicellular organism growth
GO:0035622 P intrahepatic bile duct development
GO:0042060 P wound healing
GO:0042742 P defense response to bacterium
GO:0043011 P myeloid dendritic cell differentiation
GO:0043065 P positive regulation of apoptotic process
GO:0043235 C receptor complex
GO:0045672 P positive regulation of osteoclast differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046849 P bone remodeling
GO:0050793 P regulation of developmental process
GO:0051059 F NF-kappaB binding
GO:0060413 P atrial septum morphogenesis
GO:0060674 P placenta blood vessel development
GO:0061073 P ciliary body morphogenesis
GO:0070986 P left/right axis specification
GO:0072014 P proximal tubule development
GO:0072015 P glomerular visceral epithelial cell development
GO:0072104 P glomerular capillary formation
GO:0072574 P hepatocyte proliferation
GO:0072576 P liver morphogenesis
GO:0072602 P interleukin-4 production
GO:1990705 P cholangiocyte proliferation
Transcript
Level		FPKM:2.91 TPM:2.70
ORF Entry
Sequence
(Nucleotide)
GTGGGCTCTCCGTGCGGACGCGATGCAAGCTGTGAGGTCGTAGCTCACGTCGCTACCTGT
CGCTGTCCACCCGGTACGCAGGGCGACCCTCGTCGCGCCTGTATCTCAGCGGCCTGTCAT
TATAATGAAGACTGCGATGATTCACAACTCTGTAATCGTCTCAACCGCGTCTGCCAATCA
GCGTGTACAGACAACTCTTGCGCTCCTGGTGCTTTGTGTACAGGAGAGAATCACCGCCCC
ACCTGCAAGTGTATTTCTGGATATATTGGTGATCCATATCAACGTGGATGTACATTTGCC
CAAGATACCACTGAATGTACAACGGATGCTGATTGCTCAGCGCCTTTAGCCTGTGTGGAC
GCACGTTGTATCGATCTCTGCCTGAATAACCCGTGCGATAGCGGTCTCATATGTAGAACA
GTTGATGTGCTTCCTTTACGAGCAGTTGCTTGTGTATGCCCTGATGGAGGTCGAGCTGCA
CCGGATAGTGGCTGTCGCATACCACCAGAAGTAGAATGCTCCGTGGACTCGGATTGCGCT
ACTAGCCAAATGTGCTTCCGTGGTAGTTGCGTCGAAGCCTGTAAAGCTGATCCATGTGGA
CAGAACGCGCTATGCGATTCGATTGATCATGCATCACGTTGCGTTTGTCCACCTGGATAC
AACGGAAACCCAAGATTTGAATGTAACACAGTGCCACAAGAACCAATAGTTTGGGAATGC
TATGAAGACAATGAGTGTGGACCTGAACGCGCCTGTATCAAACGATCATGTGTCAATCCG
TGTATTGATGGTTGTGGTATTGGAGCTCTATGTCGGGTGATTGATCATAAGCCACAGTGC
TCTTGTCCAAACGGTTTTTCGGGCGATGCATACATTCGATGCTTACCACCATCAGAGAAG
TCTTTTATTCCACTTGGTTGCAAAGCTAATTCAGAATGCCCATTATCTCAAGCCTGTATT
AATGGTGCTTGTGCCGACCCATGTGCTTGTGGCGCACAAGCTGATTGCTCAATTGTGAGA
CATCATCCAGTTTGTTACTGTAAACAAGGCTATTCTGGAAATCCCTATATTGGATGCACT
AAAGTTGGGTGCGACTCAGATTCTGAATGCTCGGACAGCGATTTATGTTACAACGGAGCT
TGCCTTAATCCTTGCCTAATAGATACCCCGTGTGCTATTAGTGCTGAATGTTATGGCGTT
AACCACCGTGCAAGTTGTCGTTGCCCATCTGGCACTGTTGGAAATCCATTCACGAGATGT
ATAGCAGCTGAATGCGAAACAGATAATGATTGCAATGATGATAGTGTTTGTGCGAAGGGA
ACGTGTTACAATGCTTGTTCTGTCAACGGCATTAGCTCTTGTGCAGATAATGCCGAATGT
TTCTCGCGTAACCATGCGGCATCGTGTAGATGTCCACCAGCTTTCCCGATCGGAGATCCT
TCTGTTCATTGCCAAAAAGCGACGGTATTAAACGAACCTGAGTGTATAATGGACGGTGAT
TGCCCCAGCGGTTACGCTTGTCTCAAGGATGAATGCCGTGAAGCTTGTTCCGAACTTAAG
CCGTGCAAAGGAAATTCCCGTTGTTCAGTGTCAGACAGTATACCGTTCCGAACTCTGATT
TGTCGTTGCCCAGAAGGCTTTGTACCATCTGAAGATGGTAGCTGCAAGCCGGCCAATTTA
CCACCCCTTGGTTGCTCTTCGGATAATGACTGCACAGACCAAGAGTCTTGTGTTAACAGA
AATTGCAGAAATCCATGTAACTGTGGTGATAACGCGGATTGTTTTGTTAAAGATCATAGA
CCTATTTGTTCATGCCGTAATGGATACGAAGGAGATCCTTACCGCACTTGTCGCGTTGTG
GGTTGCCGTACAAATTCAGAGTGTGACACCCGAGAAGCTTGTATAAATGGAAATTGTATA
AATCCTTGTTTAACAAACAGCACATGTGGACCAAATGCCGAATGCTTCGTTCAAAAGAAT
CAACCGCTGTGTCGTTGTCGTGTTGGATTTGAAGGAGACGCCTATTTAGGTTGTAATGCG
ATAGAATGTAGATCAAACGGAGATTGTCCACGTGATAAGCAATGTAAAGCTCACAGATGT
ATTAATCCTTGCTTCATTGAGAATATATGCGGTACGCACTCTAATTGTCTAGTTCGTAAT
CAGTTAGCAGTCTGTAAATGCGACCAAGGATATGGCGGAAATCCATACATTGAATGTAAG
CCGCAATTTGCTCAAGAATGCTACGTCGATGCTGATTGTCCGTCCAGAGCAGCCTGTTTG
TCTTCCAGATGCGTTAACCCTTGCACGACATTAAAACCGTGCGCTAATCCTGCTACGTGT
GAGGTCTCACCGACATTGCCAGTGCGTACAATGCTATGTACTTGCCCACCAGGTTTTGTG
AGCAACGGCGGAGGCATATGTCGCCCAGTCATTGAATTCTTTGAATCGATTTGTGAAATT
GATAGCAACTGTACATCGAACCATGCTTGTATATCATCTGTATGTAAAAATCCTTGTGAT
TGTGGACCAAACACTGACTGTATTATGAAAGATCACAAGCCTGTTTGTGCTTGTCGACAA
GGATTTATCGGGGATGCTTCGTCAGGTTGCTATGAAATACAATGCCAATCTGATTCTCAT
TGTGCTGACGACGAAACGTGTATAAATAGGCGTTGTGTCCCTGCTTGTTCGGTAAATGCT
AATACGTGCGGGCAATCGGCTGAATGTTATGGATTAGAACATCGTGCATCCTGTCGCTGT
AAGATCGGTACAGTTGGAAACCCATCTATAGCTTGCACTCCCATTGGCTGCAGAACTGAC
ACAGATTGTCCATCTGATAAATCATGTATCAATTCCAAATGTGATACGCCCTGCAATGCA
GATATTTGCCAGGAACCAGCTCAGTGCAAGGTACATTTACATCAAGCTCATTGCACATGT
CCTCCAGGATTCACCAATACAGGGAAAGAATGTAGAAAAACTGAAGGACCACAATGTATA
AGTGATATAGACTGCCCTTCGGGAACAGGATGTCTTAATTATAGATGTGTCAACCCATGC
CTGGTATCAAACCCATGTAGTGAAAATGCGCAGTGCAAGATTGTAGACACCATGCCTGTA
AAAACCATGGTTTGTGAATGTTTACCCGGATACAAAGGAAATGCATTACAAGAATGCAAG
CCATATCAAACTGTTGCTAAATGCGTCGAAGGTCAAGGATTAGACTTGTATGGTGAATGT
ATTCCTTGTCGACCAGCAGAAGGACGTATTATAGATTCTAGGGGTCGATGCGTTTGTGAC
TCGGAACGTGGTTTTATAATTCAAGGAGATAAATGCGTCGCTGGCGGCTGCCGCACTGAT
GACAATTGCGCAGATAATTCGCGATGCATCCGCGGTCAATGTGTAGATGCCTGCAAAGCT
GAGCCTTGTGGTATTAACGCAACCTGTGATGCGGTGGGGCATCGCTCTCATTGCACTTGC
ATTGCCGGCTACACTGGAAATCCTAGAATTCAGTGTAATGCAACAACAACAATGTACCGA
ACCGATTTCCCAACACCAGATATTCAGGTCGAATGTTTGGCTGACGGAGTTAGAGTACGA
CTTAAGATCAAAGATTTCAACGGCCTTTTGTACGTAAAAAGTTACAGTAAGGATGAGAGA
TGCAGGAAAGTTGTAGAGATGCCTAAAGACGAAGAAAGTTTTGTTTTCTTCACTGTACAT
TTCGGAGATTGCGGCCTTGTTCATGTCAATGGCTTAGCAAGCTTCGTTCTAGTAATGCAA
ACTCATCTGAAACTGGTGACATCAACCACAAAAGCATTCCACATCAAATGCATATATAAA
ACTGGTGAACAAAACGTAACTCTTGCATTCAATGTGTCCATGTTAACAACAGCAGGCACA
ATCGCCAATACCGGCCCTCCGCCTACTTGCTCCATGAGAATAATATCACGTTCTGGAGAC
CAAGTCAGTTCCGCAGAAATAGGAGAGAACCTAGTTTTACAAGTCGATGTCCAACCATCC
AGTATCTACGGAGGTTTTGCACGCAGCTGCGTTGCAAAAACAAGTGAAGTATCAACTAAC
GTAGAAAATGAGTATCTCGTAACAGACGAGGACGGCTGTGCTAAGGACCCCGCTATTTTC
GGTGAATGGGAACGAAGCGAGGACGGCAGCGCGTTGCGTGCCGCTTTCAATGCTTTCAAG
TTCCCCAGTAGTGACAATATACGATTCCAATGCAACATTCGCGTCTGCTTTGGAAAATGC
GTACCGGTTAACTGTCGCGGTTCGGACGCATACGGTAAACGAAGAAAACGAGAAGTGACC
GACGAAAGCACCGCTTTGACGATGCCGGTAGGTCAACTTCGAGAGGAGGTGACCGTCGAA
TCGAACCAAATACTAACGACGCAGCGACGCGAACCGTCACAAGTGGCTCGGCAGCGTGAT
GGTACTGGTGCAGAAGGTGCCAGTCAGAGCAGTGGAGAAGTGTGCGTGTCAGCAGCCGGA
CTCGCGGTCGCATTGGCGCTGACCGCATTACTGGCGTTAGTGGCCGTGGCGGCTGCGGTC
GCTTGTTGGCTCGTAGCCTGGAGACGTGCACGTCCTCCTCCAGCACCGCTTCCACATCCG
CCGGACTTCCCCAATCCGCTGTTCCAGCGTTGAAGTACGCCACGCACCTTCCTAGTCCCG
TACCCCGCTCCTCCGTCGGCGCCGGGCGGTGTCGGCTCTTTTCTTCTTAATCCTCAGCTT
TAATCATTGCGTGCTGTCGGAGGACCGCCGGGCGAGGACGTCGCGAGCGCTGCACACCTT
CGGGTGGCCCCTCGCTCGCGCTCACGAC
(4828 bp)

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