SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11279_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine_synthase_A,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.79 TPM:3.51
ORF Entry
Sequence
(Nucleotide)
ATTGTTTGTAAGTAATTTGAACAAAACTTTACCAAGACATCCTGTTAGAACAGCCGTAAC
GAGCGCACGCTTGCTGTCCGTAATGGAAGCTGCCGACGTAACGAAAGATGAAGAAAACAA
GTCAATCGATATAGTGCCGAATAAGCTATTAACGAGGTACAACAAACGCCGGGCACATCG
CGATTGGGAGACCAAACCTCCAGGCGAAATAAAAAAACCGTACGAAAGGATTAAGAGAAA
AAAAATGGCTATGCTGCTGGGGTACTCCGGAGTTGAATATTACGGTATGCAACGAAATCC
TGGTGTACAAACAATAGAAGAAGAATTATTAAAAGCATTGTTGGATGCTAAATATATTAC
ACAGGAAGATTTCGAAAATGCCCAGAATGCACAGTTCCAACGTAGCTCCAGGACTGACAA
GGGTGTGTCAGCTGCTGAACAAGTTGTCTCACTTAAACTACCTTTAGAAGTCAATGTTGA
AGAAATAAACAAAAGGTTACCTGAGACTATTAAAGTATTTGCTGTTAAAAGAGTAACAAA
CAGATTCAATTCCAAATCTAAATGCAATGCTCGTTCATATAGCTACACTCTTCCCACGTA
TGTGTTTGAACCTAGTTTAGTAACACATGAAAAGAGAAAGGCATACAGGATACCGGCTCA
GAAAATTGAAAAGTTAAATAGTATACTGGGGGTGTACAAGGGAACAAAAAGCTATCATAA
TTTTACAGAGAAAAAGCACCACCAAGATCCCTCATCGTCGCGGTACATGATGAGTTTCAG
TGTTGAAAAGGTCTTTGTATATTCAGATATGGAATTTGCAGTTTTAATTGTTAAGGGACA
GAGTTTTATGCTACATCAGATAAGGAAGATGGTGGGCCTGGCGATAGCCATAATGAGGGG
CCATGCCGACTCATCGGTCCTGGAGAAGGCGTTCGGTAAAGACAAGGTCATGATACCGAC
CGCCCCAGGACTTGGTCTTGTTTTAGACAAGGTCCACTACGATAGATACGACGCTCGACA
CAAAGGGACCCACGATAGCCTCACATGGGACAAAGAAGAAGAAACCATACAGAAGTTCAA
AGAGGATCACATATACCCAAACATAGTTAGGGGTGAGATCGAAAGAGATTCCATGGGAAC
TTGGTTGGAGAAACTCAGTAGGCATTCCTATGAACCGACTGAAGAGATGATTCAGGTTGA
GAAAGCTGATGCTGAGGACGTTGACGATGAATCTGATGCTGAAGATCTAGACGACGAAAA
GGATAATGATGAAGAAAAGTGTGAAAATGGTGTTGTTTCACCACTGAAAGATGTTGTGAA
GGAGGGTAAAGTTGATGATGTCACTTCATAGATGTGTAGATATATATTTTTAGCTGGTCA
AGGAGCAAACAGCGTAAACAAAAGCATTGCCTCAGCTAATAACTATTTTAATTATACTAA
GTTACTTGCCAAGCTAGTTTCAGCCGTAAATATATTAAGTTAAAGACTCATTGACATTCG
GAGCGACTGTCGAAAACTTTCAAAGTGTAACAAATGACGTCGTTGTAGCTGTTTTAGCAT
TGCTAATGACACTGGCAATGGTTGCATTTAGGCTGCTTGCTCGTACAAAAATAGTACAAA
CGAATTGAAGATTAATAATATTTATCTGAAATGACAATGTATTGGAATAACTATACTGCA
G
(1681 bp)

- SilkBase 1999-2023 -