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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11152_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		U6_snRNA-associated_Sm-like_protein_LSm2_[Operophtera_brumata]
Ontology
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006402 P mRNA catabolic process
GO:0008380 P RNA splicing
GO:0017160 F small GTPase binding
GO:0019901 F protein kinase binding
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:1990726 C Lsm1-7-Pat1 complex
Transcript
Level		FPKM:6.72 TPM:6.23
ORF Entry
Sequence
(Nucleotide)
GAACCCAAGCCAAATTACTGTTTCAGCGCGTTTTCAAACAAACAAAACGAAAAATGTTGT
TTTACTCGTTTTTCAAATCGTTAGTTGGTAAGGACGTAGTCGTCGAGCTGAAAAATGACC
TCAGCATATGTGGGACGTTGCATTCTGTGGATCAATATCTCAATATAAAGCTTTCGGATA
TAAGCGTGATTGACTCTGAAAAGTATCCTCATATGTTATCAGTGAAAAATTGTTTTATAA
GAGGCTCCGTGGTTCGATACGTACAACTGCCGGCTGATGAGGTAGACACCCAGCTTCTCC
AGGATGCCGCTAGAAAGGAGGCGACCGTTTCAACAAGATAGAACTTAACCTAACCTACAA
CTTCAATTTAAAGTGTAC
(378 bp)

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