SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11020_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		TRAS3_protein_[Operophtera_brumata]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046080 P dUTP metabolic process
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0075713 P establishment of integrated proviral latency
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:2.57 TPM:2.38
ORF Entry
Sequence
(Nucleotide)
TGGGTAGTCTATATATGCTTGTTCGCCGATCCCAATGCTACCAGGTAGACCTATAGAAAA
GAGAACAAGCATATATAGACTACCCCATCCAGCCAGTAGATATGACCTACACTTCAAGAT
ATTACAAACCCAAGAAGAGCTGATAGAGGTAACAAACAAAACCCCGACCATTTATACCGA
CGGGAGTAAACTAGAAGGAAGAGTCGGTGGAGCTGCAACTTGGTGGGAACAGGGGGAAGA
GAGGAAATCCAAAAGCTTCCGTTTAAACCCGTACAACTCAGTCTTCCAGGCGGAAATAGT
CGCAATACAAGAAGCACTAATGATGATAGCAAAATCACAACATAAAGTAGTCAACATCAT
TAGTGACTCGAGATCTGGGCTGCAGGCCATCATTAACACCAACACTACTCACCCATTAAT
CTTCAATATACAAACCACCATGAGGAACTTGGCCAGTATGAACAAGACAGCAAACCTGTT
CTGGATAAAGGCCCACGCCGGGATACCAGGCAATGAAAGAGCTGACGAACTAGCAAAAAA
AGCAGCCTTAACTAACAAACAGGCACCAAAATACGATGGAGTCCCACTATCATATGTACG
ACACACACTAAGGCAAACCACCATAGACAAATGGCAACAAAGATATACTGAGGCAAACGG
GGACGACGGG
(670 bp)

- SilkBase 1999-2023 -