SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp108734_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like,_mitochondrial_isoform_X1_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004176 F ATP-dependent peptidase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0009368 C endopeptidase Clp complex
GO:0009841 C mitochondrial endopeptidase Clp complex
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0042645 C mitochondrial nucleoid
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051603 P proteolysis involved in cellular protein catabolic process
Transcript
Level		FPKM:3.69 TPM:3.42
ORF Entry
Sequence
(Nucleotide)
CCCGGCCGCCGCGCCGCAGGACGAGGACCGCGAGCGCGACGCCTGGCTGCGCAAGGTGCA
GGCCAGGGACCTCATCGACTTCGGCATGATACCGGAGTTTGTCGGGCGCTTCCCCGTGCT
CGTGCCCTTCCACAGCCTCAGCCAGGACCTACTGGTGCGGATCCTGACAGAACCTAAAAA
TGCGATGGTGGCGCAGTACAAGCTGCTGTTCGCGATGGACAAGTGCGAGCTGTCGTTCAG
CGACGACGCGCTGCGGGCCGTCGCCGCGCTCGCCATGGAGCGACGCACCGGCGCGCGCGG
CCTGCGGGCCATCATGGAAAGTCTTCTGCTGGAGATAATGTTCGAGATCCCGGGGTCGGA
GATATCCAGCGTGCACGTGCACGAGGGCTGCGTGTCCCGCGGCGAGCCCCC
(411 bp)

- SilkBase 1999-2023 -