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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c9319_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:19.28 TPM:15.09
ORF EntryO_BomaASG1359_3prime_partial:A_BomaASG_c9319_g1_i2
Sequence
(Nucleotide)
TCCGAAAAGTGAACGTTTCACGAGTCAACAGCATCGTTTTTCGAGAAGTTCTAAGCGCTG
TTTGCGACATTTTTCTTTCATTTATTCGTTATCCAATGTTATAAGTGATGAAATAACACG
TTGTTAAGCGATTAATATTGATATTAGTGTTCATAGACGTTAAAAAAGTAATCGACAGAT
TACGATAAGCTAATATGGGCGACGAAAGCCACCCGAAAACTCTCTACGTCGGTAATTTGG
ACCCGAGTGTCACAGAAGTTTTCCTATGTACGTTGTTTGGTCAAATAGGCGATGTAAAAG
GTTGCAAGATTATACGGGAGCCAGGAAATGACCCGTATGCATTTCTCGAGTTTACGTGTC
ACACGGCGGCGGCCACAGCGCTGGCCGCCATGAACAAGCGAGTGGTCCTCGACAAGGAAA
TGAAGGTTAATTGGGCGACGAGTCCTGGTAACCAGCCGAAGACGGACACTAGTAATCATC
ATCACATATTCGTGGGCGATCTTTCTCCAGAAATCGAAACAAACATACTCCGAGAGGCCT
TCGCTCCATTTGGTGAGATATCGAACTGTCGCATAGTACGCGATCCTCAAACGCTCAAAT
CCAAGGGTTATGCTTTTGTATCATTTGTAAAGAAAGCAGATGCCGAAGCTGCCATCCAGG
CAATGAATGGCCAGTGGCTGGGATCAAGATCCATACGTACGAACTGGTCAACGCGCAAAC
CACCAGCGAAGGGTGTGAATGAAGGCGCGCCCAGTAGTAAGAGAGCAAAACAGCCAACAT
TTGACGAAGTTTATAATCAAAGCTCACCGACAAACACCACAGTTTACTGTGGCGGTTTCA
CAAGCAACATTATTACTGAAGAGTTAATGCAGAACACATTCTCACAATTTGGTCAGATAC
AGGACATCAGAGTTTTCAGAGATAAGGGCTATGCATTCATTAGGTTTACTACAAAGGAAG
CTGCTGCACATGCCATAGAAGCTACACACAATACAGAAATAAGCGGTCACACAGTCAAAT
GTTTCTGGGGGAAAGAGAATGGAGGTGCTGAAAACCAGAGCGGGAACAACTCGTCGGCGG
CGCCTCCAGCGATGGGCGGCCAGTCCCAATATCCTTACCCGTATCAGCAAGGAATGGGCT
ATTGGTATGCTCAGGGCTACATGGCTCCCGGGTACTACCAGCAGTACGCGGCCGCGTACA
GCAACCCTCAGGCCGCCGCGGCAGCGGGGTACCGCATGGGAATGGGCGGTAATGGCGGCG
GCGGCGCCGGGTGGGGCGGCCCCTCGCAACCTCTCATGTACGCGTCGGCCGCCATGCCCT
CCGCGCAGTACCCCTCCCAGTAGCAAGG
(1348 bp)

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