SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c6931_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.25 TPM:0.97
ORF EntryO_BomaASG1037_5prime_partial:A_BomaASG_c6931_g1_i1
Sequence
(Nucleotide)
TAGTAAGAAACCAAACATTTCACACTTAAGGATTTTTGGCTGTAAGGCCAACATGGCCAC
ATGGTACATGTTCTGTGGCCACATGGTTCATGTTCCGAAGCAAAATCGTTTGAAATGGGA
TCGTAAATCACAAGAATTGATTTTCGTAGGTTACTGTGAGAACACAAAGGGGTACAGATT
AATTGATCCTAATAGTAAGAAGGCAGTGATTAGCAGGGGTGTGATATTTATCGAAAATTC
CATCGATAATGTTACTCAGAAACCTAACCTAAAGCTTCAGCTTATTACTTTACCTCTCAG
TTCAGGCTTAAGTCGCGTACAAAAAGGCAATGAAATATCTTTGATACCGGTTGATTCTAG
CTCTCAAACAGACACTGAAAATGTCACATCAACACCTTCAAGTACTGATACTTCTTTTGA
CAGCTGTGTACTGAACAGAAATGATGATGAAACTTATTATCCCAGCTCAAGTAACAGTGA
TAACAGTTTCGGGAGGAATAACACTCTGAGATCACATAAAAAATGTAAGGAGCAAAATAA
TAATTTCATGTGTTCAGATTATAAATCCACTGACTGTCAAGGAAGCCTTGTTGGGCCCTG
ATGCCCAACATTGGAAACAAGCAATGGACGAGGAGTATCAGTCCTTATTGGAAAATAATA
CGTGGGAAATGACTTCTCTACCAGCTAACAAGCACCCTATACCATGTAAGTGGGTGTTCA
AGGGAAAGACCAATGAAAATAGAGAAATAATAAAATACAAGGCACGTCTTGTAATTAAAG
GGTGTTCACAAAAACCTGGAATAGAGTACACTGAAGTATTTTCACTGGTCGTAAGACATG
CTTAGTTGAGGTATTTGTTTGCCCTGGCAGTGTAATATGATTTAAATATATATGAAATGG
ATGCTGTGTCAGCATTTCATCAAGGTGGCATTGAAGAGAAAATTTACATGATGCAGCCAC
CTATGTATGAAAACGATGATAAAGTATGTCGACTGAGAAAATCACCGTATGGATTAAAGC
AAGCCAGCAGGCAATGGAACAAGAAACTAGATTTTACATTGAAGCAAATGGGTTTGTTAC
AGTCTATATTGGATCCTTGTATTTATTACAAAATTGTCA
(1119 bp)

- SilkBase 1999-2023 -