SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c30227_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		ATP-binding_cassette_sub-family_A_member_3_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001891 C phagocytic cup
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006909 P phagocytosis
GO:0007613 P memory
GO:0009986 C cell surface
GO:0010875 P positive regulation of cholesterol efflux
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0017121 P plasma membrane phospholipid scrambling
GO:0018149 P peptide cross-linking
GO:0030054 C cell junction
GO:0031901 C early endosome membrane
GO:0032587 C ruffle membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0032781 P positive regulation of ATP-dependent activity
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0034188 F apolipoprotein A-I receptor activity
GO:0034380 P high-density lipoprotein particle assembly
GO:0034504 P protein localization to nucleus
GO:0038027 P apolipoprotein A-I-mediated signaling pathway
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042985 P negative regulation of amyloid precursor protein biosynthetic process
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0050766 P positive regulation of phagocytosis
GO:0055085 P transmembrane transport
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:1900223 P positive regulation of amyloid-beta clearance
GO:1901076 P positive regulation of engulfment of apoptotic cell
GO:1902430 P negative regulation of amyloid-beta formation
GO:1902995 P positive regulation of phospholipid efflux
Transcript
Level		FPKM:3.99 TPM:3.12
ORF EntryO_BomaASG13415_5prime_partial:A_BomaASG_c30227_g1_i2
Sequence
(Nucleotide)
TGCAAGAGTTCCCGTATTATTCGCGGAAGAACAACGACCCGAATATAACGACGGGCATAG
CAAGCATCTGTCAGCTGTCTCTGCTGCTGGTGTTCGTGTTCCTCATGTCGAGACTTTTGA
ACGAGCGAGCGACCGGCATACAGGAACTAATGAAAATGGTCGGAGTGTCGTCGAGCAGCC
TGACCGCGTCGCACTTCCTGAACGTGCTGGCGGGCGGCGTGCTGTACGCGGGCGTGGTGT
GCGGCGTGCTCACGGCGGACGTGGCGCTGTTCGAGACGCGTGCGGCCGCCGCCCTGCTGT
GCGTCGGCCTGCTGCTGCACTTCGTCAGCGTCGTCGGGGCCGCCTTCGTCTGCAGCTACA
TCGTGAGAAGCACACAATGCGTGGCGTCGGTGTCGGTGATCGCGTACGGGGTGCTGGCAT
ACCCGATGCACGCGCTGCGGGGGTTGACCATGCCCGGCGCGCTGAGGCTGCTGACGGGGC
TGCTGCCGCACGTGCCGCTCGCCTGGCTGCTGGACGAGCTGAGCGTCTTGGACGGAAACG
GTGAGTCGATCACAGTGTCGTCGATAATGAAGTCTCACACGGCCGTCAGCTACTCCGTGT
TCGTCAGCTATCTGATGATGCTGGCCCAGATCCTCATATTCTTCTTCCTGAACTGGTATC
TGTCTCTGGTCAGACCCGGAAAGTACGGACAAGCTTTACCCTGGAACTTCTTGTTTAAGA
AACAATACTGGACGAAGAACGAAATAGGGCCCAAGGTCGACTCGGACGCCGAGGAGCAGG
TGCCGATAGTCAACGACAAGAAGTACTTCGAGGAGCCGCCGCAGAACGCCGAGGTCGGCA
TCAGGATCTGCAACGTGTCCAAGGTGTTCCAGAATCAGAAAGCCCTCGACAACGTGTCGC
TGGATGTGTACAAGGGCGAGATCACCGTGCTGCTGGGACACAACGGCGCCGG
(952 bp)

- SilkBase 1999-2023 -