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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c30090_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin-protein_ligase_E3A_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0001541 P ovarian follicle development
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007420 P brain development
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031398 P positive regulation of protein ubiquitination
GO:0035037 P sperm entry
GO:0042752 P regulation of circadian rhythm
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051865 P protein autoubiquitination
GO:0060736 P prostate gland growth
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:2000058 P regulation of ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:20.20 TPM:15.81
ORF EntryO_BomaASG13143_complete:A_BomaASG_c30090_g2_i1
Sequence
(Nucleotide)
TTTGTACATAGGTATGATAGGTACCTACATAAAACACAATAATAGCCAATAGGTAAAATT
ATATGTTGTACTATGTAAATGTTGTTTGTTTAGTCCAAGAGGTGAACACAAAAAATATTT
CTAAAATTTGTACCCTGCTAATGTTTACGTTATCACCGTATTTATGTAACTGGCCGTTTG
AAATCACTACAGTATTATTAAGAATTTTCTATGAACCCGAAAAGCGAGTCTGTCGAAGCT
TCGAGGGGGAGCGAAGCATCATCATCATCGATAAATTCACCCCCTGACATTGTTGAAGAC
CAGCTAACATCAGGAAATATTATGAAGCGAGCCGCAGCCAAGCAGTTAATTGAAAAATAT
TTTTACCAACTGCTAGATGGTTGCGGAAATGTTAACTGTGATAACCGGTATTGTGCATCA
AGTGGGGCGGCACGAAATTTGTCCCCCAATGAAGCTGCCGCAGAAGCAATTAAGTTGTTC
TACAAAGAAGCTCGCCTCTGTAGTTCTGTAACACCCAATAAAGTGTCTCGGACTGATTCT
AATTCATATGAGCCAAGCCCAAGTTCGACACTTGGGCCGAATCACAAAAACACATCAGAG
AATAAAGAGAATCAAAATATCACAACACCGGAGCCAAGCACTGCGTCACGAGAGGAACCT
CATACTAGTCACACTGCACAGCAACAGAAACAAAAGAAAAGAAAACGCTATAACAATGGA
GCACCACTGACGGAGGAACGAATCTACAAGCTGTGTGATGAGTGTCTGCAGAATAGAGCC
GAGGAGCCACTGTCGAAAGCATTGAGCAAAGCATTTTCACGACCCTCAATCCTCGCCAGA
TGTTTTGCTAGTAAAATTAGTGAAAATGCCAATGAAACATCGAAAGATACAGAAAAAGAG
TCCAAAGAATCTTCGAGATCCTGCGACCCCGACAAGGACATCGACAGCGTCGCGGCGCCG
CAGCTCGACGTCGCCTCGTGTCGCAGAGCCTTTCAGTATCTTGCCAAAGTTCCAACGGAA
TACTACAGTACAGATTTAGTAATTGCACTCAAGTCTTTGGGTTCATACTTAACTAAGGAT
TTAAAATCTGAAAAATTGAGCATAGAGGATGCGGTTAACTGTTTCGTCATTACATTTGAA
CTACCAAATTTGGGGTGCAGCGATTATTTTGAAATCGCATTACCGGATGTGTGTCTGGCT
ATCGGAGAACTACCTATCAAAGGTCAAGCAAGACTGGCCCGTATCTGGTCTCAATACTGC
AAGGATAGTTTACGTAACATATTGGAGACGCTACAGCAACTCATCAGTTTGAGGGTAGTT
TCGTGTAACTACCACGTGTTCTTCCACGTACAAGAAGACGGACATGTGACTGGGCCTACA
AGGGTCTTAAAGGTCCTATACTACGCAAGCATATTAGCTGGAGTTTTAGATTCAAACACA
TTACATGAGGAACCGATTGTGATCGCACACCAGCACGACCCACTCGAGAGTGTATTAGGA
CATTTGTACCCGCCTTCGTCGATGAAGGGTGCGAGAAACTCACAACTCAACGACCCTTTA
GCCGTCGAACTAGGCGTTAGTGTGCTAGACTCGAGAACGCCGTACCTGCCGTTCGAAGAC
TTCTACAACGAGCCGCTCAGTGATGTCATAGAAATGGATAAAGATTGCGAAGATTATGAG
ATGGTAATTAGTAGGCCCAACACGAGGTTCTCGTTCCTGCGGCACCCGTTCGTGCTGACG
GTGGCCAGCAAGTCGCTGGGGCTGTACTACGAGAACCGGCTGCGCATGTACTCGGAGAGC
CGCGCCGCGCTGCTGCAGGCCGCCGTGGGCGCCGCGCGGCCCGAGCCCTTCCTGCGCCTG
CGCGTGCGCCGCTCGCACCTCATCGAGGACGCGCTCGTCGTGCTGGAAATGATATCAATG
GAAAGAGCTCTGGATCTGAAGAAGCAGTTAGTTGTTGAATTCGAAGGGGAACAGGGCGTC
GACGAAGGAGGTGTCAGTAAGGAGTTTTTCCAACTAATTGTCGAAGAAATATTCAACCCG
GACTATGGCATGTTCACGCACCAACAGGACTCTCGTAATGTATGGTTCAACCCCACATCG
TTTGAAACGGAAGCACAGTTCACTTTGATTGGTATAGTGCTCGGTCTTGCCATATACAAC
AATGTTATTTTAGCAGTTAACTTCCCTATGGTCGTGTATAGAAAGCTATTAGGCAGGAAA
GGCTCTTTCGAAGACTTAGTTGATTGGAATCCTATTTTATACAACGGCTTAAAAGATATG
CTGGAATACACGGGCGATGATCTAGAAGAGGTTTATTATCAGACATTCAGGATATGTTAC
CAAGACGTGTTCGGAACTAATATGTTTCACGAATTGAAAGTGAACGGAGATAATCTTTTT
GTTACACAAGAAAACAAAAAGGAATTTGTAGATTTATATGCAGATTTTTTACTTAATGTA
TCGGTAGAGACACAGTTCAGAGCGTTCCGACGTGGATTTTTGATGGTCACCGATGAGAGT
CCACTCGGTGCATTCTTCAGGCCGGAAGAAGTTGAAATGCTTGTTTGTGGAAGCAAGGTT
TTCGATTTCCACGAGCTGGAAAAGTCGACAGAATACGATGGCGGCTACGCGTCCGACTCT
AAAATCGTACAGGACTTTTGGGGCATCGTGCACAGCTTGCCGCTGGAGGACAAGCGGAAG
CTGCTTCAGTTCACGACCGGGTCGGACCGGGTGCCCGTGGGCGGGCTGTGCAACTTGAAC
TTTGTGATCGCGAGGAACGGCCCGGACTGCGACCGGCTTCCCACCGCGCACACTTGCTTC
AATGTCCTACTGCTACCCGAGTACGACACTAGAGACAAACTACAGGACAGACTCTTGAAA
GCCATCAACTACTCGAAGGGATTCGGTTTGCATTGAAGATGCTATACGACGACGACGCAA
CGCAACGCGGAACTAACTCAACAAAATTAGCATAATATTATAGTGGAGGAGTCGCCACGA
TGATGTTTCTGTATCATTGATGATTAAAGTTTGTTTTATTTAAGCGTAAAAAAAAAAAAG
(3060 bp)

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