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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c30089_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
Transcript
Level		FPKM:0.62 TPM:0.48
ORF EntryO_BomaASG13140_3prime_partial:A_BomaASG_c30089_g1_i1
Sequence
(Nucleotide)
GGCGATATTTGATGTTGTACTATTTTGAAGAAGTTCATATGTTTTACTTACAAATGGGAG
GTAAATAAGTTTAGTATAAGGTGCAAAACATAAGCGCCACAATAATTGAATCACTACTTG
AGTACATAGTGTTTAGAGCAGTGACTATCATGACAGACACAAGACGAAGAGTGAAATTAT
ACGCTCTGAACGCTGACAGACAGTGGGATGATCGAGGAACCGGGCATGTTTCTTCATGTT
ATGTTGAAAGGTTGAAAGGAACCTCACTCATGGTTAGAGCCGAATCTGACGGCTCCCTGT
TATTAGAAAGTAAGATACAACCTGATACAGCCTATCAAAAGCAACAGGACACATTAATAG
TGTGGTCAGAAGGTGACAATTTTGATTTAGCATTAAGTTTTCAAGAAAAAGCTGGCTGCG
ATGAAATATGGGAAAAGATTTGTCAGGTACAAGGAAAAGACCCATCAGTTGAAATCACTC
AAGATATTGTGGAAGAATCAGAAGATGAACGTTTTGATGATATATCAGATAGTGTGCAGC
CTGTGGAACTGCCTGCATGTGAAATGGGACGCTTGGAGGATATTAGTGAACTTGTAAACA
GTTGTTTGGTCTCACCAGTACGTAAAGATAAGTTAACAGCTGCACTAGAGAGCCAACACT
ATATAAAGAAATTGTTGAATCTCTTCCATATGTGTGAGGATATTGAAAATATTGAAGGGC
TGCACCACCTATATGAAATCTTTAAAAGTATATTTCTTCTTAATAAAAACACACTTTTTG
AAACTATGTTTGCTGATGACACAATATTTGATGTTGTCGGCTGCTTAGAATATGATCCCA
GTTTGCCTCAGCCCAAAAAACACCGAGAGTATCTTAGAGAATTAGCAAAATTTCGAGAGG
CAATTCCTATAAAGAATAAGGATTTATTAGCTAAAATACATCAAACATACAGAGTTCAGT
ACATACAAGATATAGTCTTACCTACACCTACAGTTTTTGAGGATAATCTTTTAAGTACAT
TGTCAAGTTTTATATTTTTCAATAAAGTAGAGATAGTGAAACTCATAGAGGATGATGAAA
AATTTTTGACTGATTTATTCAAGTTATTGATGGATGACAAAACACCTGATATCAAAAGAA
GGGATTCTGTTTTATTTCTGAAAGAGTTCTGTAATTTTTCCCAAAATTTACAACCTCAAG
ATAAAGATGCCTTTTATAAAACTTTAGTCACTTTGGGTATCCTGCCAGCATTAGAAATCA
CACTAAGTATAGATGATCAGAAGACAAAGACTGCTTCAATAGACATATTAACATATATTG
TGGAATTCTCACCTTCAGTTGTAAGAGATTATACATTACAACATGCTAATAATACTGAAG
AGGAGCATATGCTGTTAAACATAGTTATAGAACAGATGTTACAAGATCGGGATCCAGAGC
TGGGTGGAGCAGTTCAATTGATGGGTGTTTTGCGTATTTTGCTTGATCCAGAAAGTATGC
TTGCATCTGTTAACAAAAGTGAAAAAGCAGACTTCCTAAATTTCTTTTATAAACACAGTA
TACAAACCTTGATTGCTCCTTTACTAGATAATACTACTGGTGAGAAGCCTCTAAAAGAAG
ATTATCACACAGTGCAGCTTTTAGGACTTGTACTAGAATTACTTTCGTTCTGCGTAGAAC
ATCACACATACCATATCAAAACCTGCATATTAAATAAGGACCTTCTCCGACGCATCTTAG
TGCTGATGAGGTCGACACACACATTTTTGGTGCTTGGTGCCTTGAGATTTATGAGAAAAA
TAATTGCATTGAAAGATGAATATTATAACAGATACATAATAAAGGGAAACCTCTTTGCGC
CAGTTATAGATGCTTTCCTCAGGAATAATGGCAGGTACAACTTGCTTGATTCCGCAATAT
TAGAATTATTTGAATTTATAAAACTGGAGGACATCAAATCATTATGTTCGCATGTTGTGG
AGAATTATGGAAAAATATTAGAAGATATTGAATATGTGCAGACTTTCAAAGCTTTAAAAA
CACGATATGATCAACATCAAGACAAATTAAAAGAAAGAGAAAGAGTGAGCGGTAGTGTGG
GCGTGACGGAAGCGGTTGTCCCATCGCTACTGCGCACGCGGTATCGTCGAGAAGCACGGG
CGCCGGACGAAGAAGAAGAGATGTGGTTCAACGATGATGATGAACTAGAAGACGAAGCGC
CGCTAGAGTCGGCACAACCGCACGCCCATCCACATGCGCACACGCATCACGGACTAGATG
CGATCGGAAAAATAGTTGAGAAGAAAGTTTGCTCTAATGCAGAGACAGTTAACGGACCGA
CTAGAGTTCTTCTAAGTACAGCGACGTCACCCAAACCGACGCATGCTGATGTTCAGGGCC
TTGTTGACTACGACGGCGATTCGGACGAGGAAGAGGACGGCGGCGGG
(2447 bp)

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