SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c30008_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101741811_[Bombyx_mori]
Ontology
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:6.49 TPM:5.08
ORF EntryO_BomaASG12933_3prime_partial:A_BomaASG_c30008_g1_i1
Sequence
(Nucleotide)
GTGGGTGCCTTTATTAATATAATCATAACCTAACAAATTGACTAATGTTTAACTTAAGAT
TTACTTATGTGTAAACTAAATTATTAAAATTAATCTATAAAAAATTATTATATATTTTTG
TACAACAAATTTCAATAATTGAAAAGAAATATGTTGTGTCCAGAAGTATGGGATTTCCCG
CCACCTAAAGTTTATTGTACGTCGAATAAAAGTATAACATTAGAATCGGTACAGAAGTTC
ATCAAAATGAATGATTATTATCAAAGTATTATAGTTACATGCCCGGATACTACACAGATG
CCGAGTTTCATCAAAGACACAATTACGGAGGACAGTGTATACTACAGAATAAATGATTGT
TCGCTTATGGAAATAATTGAACCTATTTTTATAAATACTTTTGTTAAAAATGGATACTTG
TATTGTTTATCAAGTGAAAGAAACTGTGTCATACAAAATTGTTTTGCTGTAACGCCGGAG
GGAATTCTGATATTACACATTCTAGAATATGATTTTCAAACACTAGGATTCGAAGGCCAC
AAGCGCCCTCATAATTACTATGAGGTATCAATAAAATTGAAAGAAATAAAAAATTATGAT
AAAATACGTCAAGGTCTTAAGAAGTTGGGGAAATTTGATTTTGATGTTATATGGGAGCCG
ACAAATGAAGATATTTGTCCATCAACCATAGCTAAGTATTTTTATGAACTTAACTACAAA
GTAGCTGCAAAACCTCCAGTTTTGAAAACTGTATCACCTACCATAACTGAAATACCATCA
GTTTCACATGCCAGTATAGATGAATTGGTTGAGTGGACTGGAATACTTGCTCACAATGGT
AACCTGTCACAGCACGAGACATACATTAGTACTTACTGTCCACCTGAGAGTGAATGTTCA
TTACATTCAACAAACATTTCAGTTATAATTGTTGAAGGTTACTTCTCACCTACTGTATTA
CAAAAGCTATGCAACATTATAACAGATTATGTAAAATCTAGAGACTTGGATGATTATTGG
G
(1021 bp)

- SilkBase 1999-2023 -