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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29987_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:149.15 TPM:116.71
ORF EntryO_BomaASG12888_complete:A_BomaASG_c29987_g1_i1
Sequence
(Nucleotide)
GCCACAACTCGCTGCTTCTCCACGATCGAACGACCGACGCCCGCGCCCGGTGTCGTATTA
CAGCTCTAAATTTATCTCGCGAGCGCGATCGCCAATTTGGAAACGGTCGCGCGCCGTGTT
TTGAACTGGTGATTGACAGTGCCGAGTGAGGAGTGATCCCCTGAGCGACGTATTACCGCC
TGCCGACATGGCACAGTTAATAACTGTGCGGCTTAACAAATCAGATCATCAACCCTTGGG
CTTCAGGCTGCAAGGAGGCAAGGACTTCGGCACCCCACTAGTCGTTCAAAAGGTGAATGG
CGGCAGTGCGGCAGAGCGGGCTGGCTTGCAGGCCGGCGACGCTCTGATTCGCGTCAACAA
CACAGATGTGTTCACCCTGCGTCACCAAGACGCGCAGGACACCATCCGCGCGGCTGGTGC
TAATTTAGAACTAACCGTTCAACGCGGGGGAGGTACGTGGCGTCCATCAGTGACCCCGAC
CGGCAGCTTGCCGAGACCCGGCTCTCGTCCTCTGGGAGGTACTCCGACTCCGGTGACGAA
CACATCCTTGAAGGCGAACCCACAACCGTCGCGCAACTTCGGCTCCGGGCACAACAATGT
CGCTAAGCCTTTCGGTTATATGAACGGTAACGACACCGTCAAGAGTGTCGTGAACAAACA
ATACAACACTCCTGTCAATATATACAGCGACAAGACAATTGCGGAGACCCTGTCGGCCCA
AACCGAAGTACTGGCTGGTGGAGTACTCGGAGTTAATTTCAAGAAGAATGAGAAGACGTA
CGATGCTGAAAAAAGCGCTGTTTTCAAAGTACTTCAGGAGGAGCAAAACGACCCTGAACC
AGAAGTGTCGACTCCGACCACCGGCTCAGTGCCCCCGGTGAGCGGACTTCGGCACGTGCA
GGCGCCCGTCACGCGACCCGACGCGCCCGTCAACAACACGGGCGGCCTGCCTCCCGGACA
GAACATTTGCGAGGAGTGCGAACGATTAATTACGGGAGTGTTTGTGCGCATCAAGGACAA
GAATCTTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGGAGCTCTTTGAAGAATCAGGG
CTATTACAACATAAACGGTAAACTGTACTGCGACATCCACGCCAAGCTGGTCGCACGTCA
GAACCCACCAGCGCCGAACTTGGACCCTGTAACCGTGCCACCCGGTGGCCGAGTTCCTAC
CAACACATACTCTACGCCTCTGCCGCCACTGTCTACCAATAACTACAGCAATGGATCGTC
TTCGCTGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAGCCGTTCGGGTCGTCGGTGGG
GTCCGCGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCGCTGTCGCCCGCGCGGCCACT
CACCGCGCCCGCCCCGCCCCCCGCCGCACCCTTCGCCCCCACTAACGATGTGCAGACCAC
AAGCAGTTCTCAGAAACCAGAGTTTAAAAGTCAAGCTGAAGAACGTCTCATACGAAAAAT
GGCTAAAATGGCATTAAACGGATATGAAATTGGCATTCAACGTAAAATAAAGCCAGCCGA
CCACATCCAATCTATGGCTGATAAAATACAAGACACTGTCGTTACTAAGCATCCTCTGAA
TACCGATGGTTCGTCGGAGGAAAACATTCGTGAGAATAGTACTCTAAGAAAAATCTCCAC
TAACGACAACGTGTACAAAAATACAGAATTCGGTAGTATGAATGACAGAGTTAAAGAGAG
TAATTTCTTAAATGCAATAATTTTCAATGGAAGTACTCCAGTACCTCCGCCATTACCTAC
ATCTCCTATACCCACTTTCAATATTCATAGTACACCTCTTGGAGAACCAATAGTTACGGG
TAATATCAAAAAACAATCTGATTTACCAAAAAATTTTAATATCGATTACGGCCTAGATTT
CCAGAATGAAACTTTGAACGGATCCTTAAATGACAATGATTTTAAAATAATTGATGACCA
TAAAAACACAACTAACACTCTCAAAAAGACGAATGGTTTTCAAAATTCTTTCCTGAACGG
AATGAATTCCACCAAATCCGAAAAGAAACCAGATCAAAAGTTTGAAAATAACATTTACTC
TAATACATTGAATAAACGAAAATTATTTGAAAACAAAGATGATACTAACAATTTCAAACA
CTCGCCATGTGACTTAAAGAATGAAAAGAAAATCATTGACGTATATTCAAAAGCAAATAA
TTCCAATCAATCTTTCAAGTTAGACGGTCACGACTTATCTAACACAACGGAAGAGACAAA
GCCGGCAGTTCTGCCGAGTTCCGTTAAAGAAAATTCATTAGTATATGACGCACATGATTC
AGCAACTGTCACCGATGACCCTCCATCTAAAGTTTATGAAACCGATAATGACACATTCTC
CGAATCAAATACTTTAGAAAAAATAGTTAATAATACTGAGGACGTTGTTAGACGACGACA
GAAAAAGAACATTAGGAATGATGACGGTAGAAGGGATTCTCATATCATCGCCAGACCACT
TAGTACTATGACTTCTGTAGATGTTGAAGAGGGAATGTATCCTGTATGTCACATATGCGA
CAAGGCTATTACAAGAGGTCCATTCATCACGGCTCTTGGACGCATATGGTGCCCCGAGCA
CTTCATCTGCGTGAATGCAACATGCAGACGTCCTCTACAGGATATCGGATTCGTCGAAGA
GAACGGACAGCTCTACTGTGAATTCTGTTTTGAGCAATACATAGCACCCGCCTGTGACAA
ATGTCATGCTAAAATTAAAGGCGACTGTTTAAACGCCATCGGTAAACACTTCCATCCAGA
GTGCTTCAACTGCGTTTATTGCGGAAAGTTGTTCGGAAACAACCCGTTCTTCTTAGAAGA
CGGACTGCCATACTGCGAAGCAGATTGGAATGAGCTCTTTACAACAAAATGTTTCGCTTG
CGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAG
TCAGTGCTTCAACTGCACGGTGTGTAAAAAGAACCTCGAAGGACAGAGCTTCTTCGCCAA
GGGAGGTCGGCCTTTCTGTAAAACACACGCCCGTTAAAAGTCCAATAAAAATAATCTACA
ACTCGGACACTGTTTACTCGACTACTACTTTTCGTCCGGTTTCGCCGTTGCCGATCACGC
CGCCGGCGGTCGGTACGCCGTCGCCACAGAGAACTAGGAAGTTGGAAACACCCCTCCACT
TCGATGGAGGACTGTTTTCCGACATAAGAAGTACAGACGGAAAGTTACTTAGCAAAGTAA
CGGTCGATAGGGTGCAGCGTTCCACACACCATGACGTCATCGACTCCCCGAGTACTGTTG
AGGTGCACGACAAAAATTACGTCGACGATATAATAAAATCCGAAACTATAATAAATCAAG
ACATAATAACGGTCAAATTCACTCCGGTCCCACCGGAATTCGATTCCCAAATGATAAGTC
CGCAACTGGCCAAACGGTCCAAAACACCAATTCAATATCTCAAGGATGACTTTGTTGATT
TGCAAAGTTACAAAATTGTGAATTCTTTATGTAAAGAAAAACTATTAGAAGCTAATGCTT
TACGGACACAATCTGCACAAGATTTGATCACATTAGAACCAACTGAAGTCGAAAGTAGTA
CTCTAGCCAAGTTTGTAAGGTCTGTGAGTCAACAAAAGCAAATTAGCTGCAGTGACAGTG
ATCCAATGGGCCAAGAAATTAATTCGATACCAATTAAAATGGAGTCGGATTCTTTAACAA
GTTTAGTTGAGAAATCGATCAAAACTGGAACTGTGAGTGAAAATCGAGAGCTCGATCACT
TTTTGAATACGGACTTGTCAAAAATCGAGAGGAGCCTTAGTCCTTTGCCAAATTTCTCGA
TCACGGAACGTTTGACAAAAATTAACAGTTACTTGCAGGAGAGCCTTGACGTCTGCAGTG
GTAACGATAGCAATAATCGGTGCACTCCGTCCATTATACACGATAATGTGGAAACGAAAC
ATGAATACTTTAGTGAGGCATTTGATTGCGTAAATGTGCAGCAGAATATTCCTGCAAATA
GTGTTTTGGACAGTTCTCAAACGGAAGCAAATTCTGTTGATTCTCAGAACAATCGATCAC
TTACCGCACGCGAGAATTCTGAATATACAGACCCTAAGAAAAGTAAGTCCACATTAAACA
GTGTCCGCCGGGGACGCCCTTCGATTTTGAACGCTATATCAAACATGCCGATACATTATC
ACGCAGCGATTTTGTGTATTTTCTTAATTGTATATAACCTTATATACCAATATATTAAAT
TAAATTGTCCAGGTAATAAAATATAATATAGGTTTTAAGATTGTTCAACGGAATTGTATG
CGTTAAACTAGTCATTGCAAAACTATTCATACGTGTTATATCTATTAGCAAATGTATTAA
TTTTAGATCAGGATGTAAATAGTCACATAACAGCTCCCGCGTTATAATTTAACTAAATTT
ATCTAAAATTAACATTATGGCGCTTTTCTCACAATTGTGACGATTGACAATCCCTTCATA
TAAGCTTTGTAAACAGCTTCGGAATGTTTAAAAAATATATACTAACTTTAACATCTGTAA
GTTTATTACATTTTTTTTACAATTCATAATTTATTTATT
(4659 bp)

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