SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29897_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ras-related_protein_Rab-39B_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045335 C phagocytic vesicle
GO:0090383 P phagosome acidification
GO:0090385 P phagosome-lysosome fusion
Transcript
Level		FPKM:7.81 TPM:6.12
ORF EntryO_BomaASG12741_complete:A_BomaASG_c29897_g1_i1
Sequence
(Nucleotide)
CGTAATTTTGACGAGATTAATGTTGCTAACAATTTTATTCAATGTTATTGAATTGAATGT
ACATTAAAGAAAATGGTCGATCCGATATTTGATTATCAGTTCAGGCTTATCCTAATCGGA
GATAGCACGGTCGGCAAGAGTTCTCTGCTTAAGTATTTTACGGACGGGAAGTTCGCTGAG
CTATCTGATCCGACTGTGGGCGTAGATTTCTTCGCTAGAATCATCGAGATCCAAGATGGA
ACAAGGATTAAACTACAACTCTGGGACACGGCTGGACAGGAGAGATTCCGTTCCATCACG
AAATCGTATTATAGAAACTCCGTTGGAGCTTTGTTGGTGTACGACGTCTCGAACAGATCC
AGTTTCGAACATATACCATTATGGATGATGGAAGCCAAGAGGCACATAGAACCTCACAGA
CCAGTGTTCGCATTGGTTGGCTGTAAGCTCGACCTAGTCGGAAGTGATAACAAGAGTGAA
TCAAGACGAGAAGTGTCATGTGAAGAAGCCAGGCTATTTGCTGAGGAAAACGGCCTACAT
CACATAGAAACATCAGCAAAAACTGGATTAAATGTCGAGCAGGCATTTGTACTTGTAGCT
CAAGAAGTCTACAACCGAATCCAGACTGGTGAGTATAAAGTGGAAGACGGATGGGACGGA
ATAAAAACAGGATTCAATCGACCAAATGGTACTGATTTCAATTTACTTGAAGCAGAAGCT
GTACACTCAACGTGCTGTTAGATGAAGAGCATAAAAAGGCTATGTAAATATGATTCACAA
TAGTTGTAATTGATATTTAAGGATAAATATACTTTTTT
(818 bp)

- SilkBase 1999-2023 -