SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29896_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.95 TPM:2.31
ORF EntryO_BomaASG12738_complete:A_BomaASG_c29896_g1_i1
Sequence
(Nucleotide)
CGCCCTCCGCGCCGCCCCCCTCCGCGCCCGGCTACAGCGACGCTACTGTCTCACCGCCCG
GGTCTGACGATGAAGGCAGCACAGCGGCGACAGACGGCAGCACCCTGAGGACGTCACCGG
CCGAGGTTCCGGGCTCCGGCGGCTCCGAGAGCGGCGGCTCCGGCGCGGACAGTATTGGCG
GAGTTTCTGGACGCAGTAGCGCGTATGCTGGACCATCGACGTCTTCTTCCCAACCGGTTG
CGTCAACCTCAAAGACCGTGGAAGCCGAAAGTGAAAGCCGTAAGCTTCATGCCCTGCGCC
TGTCCATGCTCTCGGCTGCTCTAGACGCTCTGCCCACTCTGAGAAATTTGCCTGGAGTAC
GAGCGATACCATTCTTCCAGGTCGTCCTAATGCTAGCCAGCGACTTGGATTCAAGCTTGG
AACGCGATCGAGCCGTACTAGACAGGCTGCTAGAGCTGCTAGTAGCAGAACTGGACATGA
AACCTGAAGAGAATGCCCCCACTGAAGACCGTACTGAGCGAGGTGAACTGCAGCTAGCCA
TCATGCGCCTGGAACTGTTGGTGTCGGAGCTCGACAACCAGGGAGAGGAAACCTTGCCAC
CGATCCACGAGAGGACCAATCGAAGAGAATTGCAACTCGTCATAATGAGACTGCTCAGTG
TACTGATGGCACGTTGGAAGACTTCGACGTCGACCGGTGCGGCGCAGCGTGTGGACGCGG
CGGGGGCGACAAGCGCGGCGCACGTGT
(747 bp)

- SilkBase 1999-2023 -