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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29778_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:17.48 TPM:13.68
ORF EntryO_BomaASG12550_complete:A_BomaASG_c29778_g1_i1
Sequence
(Nucleotide)
TCACACGTGAGCTAAACAAGTTCGTTTTGCCTAACGAATTATACAATTTCACATGTAAAG
TTAATTTCGTGATTCGTGTTCAGCGCAATGCCGAAGTCTATTAAGCATCTGATTGTGGAT
ACCTCTGCATTCATAAGGGCGGCAAACCTTCAAGACATTGCTGAAAATGTTTATACTATA
CAAGAGGTTATTGATGAAATAACTAATGATAGGCAAAGAAAAAAGCTCGTTGTCCTTCCA
TACGACTTAAAAGTCAAGGATGTCTTCGCAGATAACATAAAATTCATTACTGAATTCTCG
AAGAAAACAGGTGATTATTCTAGCCTCTCTGCTACAGATATTAAGGTTATGGCACTGACC
TACCAGCTAGAGAAGGAGAAGGTTGGCGGTACGGAACATCTTAAAGATGAACCGACTATG
CAAAAATCTGTTAAAGTTACAGGATTGGCTGGGTTTAACCTTCATCCCAATTATGAAAAT
GCCAATCAGGAAACAGGTGAGAAAGACTCTAATGCAAACAATAACAAAGAGACCAGTGAA
CCTTTACAACAACCCATAGGCGAGACTGTGAATGTTGAAACTGGAGAGTCATTTGAAGTC
AAACACCAACAAAACTGTCAAACAACAACAAATGAAACTGATGATGATAAACTGGCTGAA
GAAATTTCAAAACAAATCAATGATATGGATTTGAAAGATGACAAAGTTGATGAGCTAATG
GTTAAAGTCTCTGATGAAGAGGCTACAGACAGCTATGATGATGATGATGATGAAGACGAG
ACAGATAGCGATGGTGGAGAATGGATCACAACCAAAAATTTGGCTGAAAAACGAAAAGAG
ATGGAACTTGGTGAATTTGAAGAAAAAGATGTTGAAGTTGCCTGCATCACTTCGGACTTT
GCAATGCAAAATGTTTTAAAGCAGATAGGACTAAATGTTACATCAATAGATGGAAGAATT
ATAAGACAATTACGTACATTTATTTTTCGTTGCACAACCTGTTTCAAAACAACTAGTGTA
ATGACAAAACTGTTCTGTCCTAAATGTGGTCATGCAACTTTAAAAAAAGTTGCAGTGAGT
ATTGATGAAGATGGTAATCAAAGAATACATATAAATGGCCGTAAACCTTTAACAGCAAGA
GGAAAAAGATTTAGTTTACCTACACCAAAAGGTGGTCAACATTTTCAATACCCAATTTTA
ACTGAAGACCAGCATATACACAAAAGATTTGTTACCAAATTAGCAAGAAACAAAACAAAT
GCTCTAGATCCTGATTATACTGCAGGATTTTCTCCATTCGCAATGAAAGATGTGAATTCC
AAATCGGCCGTCTTGGGGGTGCGTGCCAACAATCAGGACATAAAATATTGGATGAAGCAT
TATTCTAAAGGAAAGAAAAAATAAATTGAAACAAACACATTCTTATTTATTAACTAACTA
GGTACATAGACATAAATTTAACATTAATAAATGCTCATTCTTAAACATAACCAGAGAATA
AAAATTCGCTATTATAATAGAGTAGTACCACGTGAATATTCGTTTTAATTCATATTTAGT
ATTTCATCAAAGTATTTAAAAACAGAATCCATACACATGTATGATGTCATTTCATGTTTC
TCATGACCTGCAAACAAAGTTTTCTTATATATTTGACACAACACAAATGCAGAGTTTCAG
TGGTATAAGTCAACCTTTACCAATGGTTGCTTCAATGTTACTATTGCAGCACTTAATAGT
AAGCTTTTAGCTCAACCAGTGATTAATGCTCAGTGTTACTCATGGACAAAGGCAGTGCAA
AGATTTGGATAAGTATGTAATTATAATCTAGAAAATAAGTTCATAGAAGTTAAAGAAAAA
AGAATAGCCATAGTCTATTCCCCTTAAAAACACAAATAATTTGATTTTATGAATGCAATA
TTTATACCTGCTGAAAGTCTGGTTATATCGAAATCAGGAGTTCTGAGAGGTGTATCCAGC
GGTGTCTGACTAGATATCCAATTTTTTGTAACCTGTAATATCAAGAAACCAATTAGGAAA
AGTTAAATTTCAACTGTGCATGTCTCCAGTTACATTCTTACCTGTTTCAAAAAGTTTGTA
AGCTTCTTGTTAGAATAGGAATGTACAGAGTCAGTAAAAGCAATGGCCTTTACTCTGTCT
TCAAAGTCATTTTGCACCTCTTCTGCCAGAGAAACCGTGACAACCCCACCATAACTATGT
GCTACAATGAGTATGGAACTTGCATTCGCATTGGATATGTAGTTCAGCCATGCGTAAAGG
GCATGTTCCTCAGCGGTGCTACTGTTGAGAATGGTCTTTCCATCTGCTGTGTGGTTGTCA
TTTGTATTTAGTACCACTACTCCATAGTCTTTGGCCAAAGCCTTCTTGATATACGGAACC
TGAGATCCTTTGTCCAACGATTCATTGATTATGAGGCTGTGACAAAAATTACATTTCAGT
ACAAATATACTGCAGGCCTAATTACGTGACCTACTTTAAAACAAGACATGGAGAAAACAA
AAAATATGCATTGATTACGTACATATTAATACATAGATGAATAGAATATTGCCATTGTGA
AAGAAGAACAGAAGGGTAATACCATATTTGTACCAACCAAGGATAATGAACAGAATCAGG
AATTAAGTCACCATTATATATTTCTATATTAATTTTATGATTCAGTACTAAGA
(2693 bp)

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