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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29737_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		protein_SMG5_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:20.21 TPM:15.82
ORF EntryO_BomaASG12482_5prime_partial:A_BomaASG_c29737_g1_i1
Sequence
(Nucleotide)
CACACTTCCTGATATTGATAAAAATTATGATGATTATCTATCAATTTTGGAACATGAAAC
CAATTTTCCATCTTATTTAAATCCAAATCTAATACATCGTATGGTTCTGATTTGTTTATT
CACAGTCTCAAAAATGACAGAAATTGATGAAACAAAAGCCTTTGCATGCAAAGCTTTCAC
TCTTGCTCTTTTGTCTCAACTTTTGTTGAAATTGCTTAAGCAATTGGATTCAATTGGTTT
TGTAAATCCTAGGCAGATTCATAATTATGGATCGTCAAAACCACACAATGAACAAACAGA
AAAATATGAGAACAATAATGATGAAAATAAAGAAATTATAGAAAGCACAGTGAACAATGG
CCACAATGCAGAACAAGAATTGGAGGAGCAGAAACAAAATAATGTAAAAGAAAACAATCT
AAATGGTCATGCTAAGCATGCAAAGAAAGCACTTATGAAATGTCGTCGCCGTCGACGCAT
TGCCTCTTCAGAAAGTTCTGACGTGAGTGATGCTAATACTGAAAGCAGTGATTTAGATGA
AATTGAACATTCATATAGCGACTTGTCAGATTCCTCTGATCAATCTGTATCACTTAGTGA
AGCTAGCGATTGTGATGAAGTTAACGATGAAACTAAAGATGAAAGTAGTGAACAATTTAA
TGAAAAAGTAGAACCAAATAGAATATTGAATGATGATATCACCTCAAAGATTACAGAAAC
AAATTCACTTAATTCATCAAATTTATTGAATTGTAATACAACAAAATCTCAGCAAACCAG
CAAAGTAAACACTATAGAATTGAAAACTTTTTTACAAGGAAACAATTTCATGGCCAGTAT
CAAGCTGTTGTTGGATTGGATTTTGATTGAAAAAGATTTAATTCTTTCATGTGGCGACAG
CGGAGAGTCCTTGTTTCAATGCGTTGTAGATTTGCTAAATATTTTTACATTTTATTTCTA
TACAAAATCTGATGAGGGGACTAAAGAAGATTGTGAATTAATAAAGTACGTTAGAAATTT
AGTCATGAAAATGAAACTTGAATATAAGACAATACCCTTACCTGAAGATATAAATTTACG
GGGAACAAACATTTGTAAATTTGATAAAGATGCTGCTGAATGGCACATCTTAGAAAAGTA
TAAATTATCTGTTTATGAAGAAAACGTAATAAGGATTCTTAACTTCATAGATTTTGGGAA
CCAGATAGCTAAAATTATACCCAGAATAAGATTTAACAGGACCATGAAATTGTTTTATCT
AAAAAACATTCACCCTCCTAAATTGAATACCAAAATTAACCATAAAAGAAGTAGAGAATG
GCATTCAAAGAAAAATACTGAATCGAATGAAAGTGGATTACTACGGCGCCTTGGTCGACT
ATGGTTGACATCACAAGTACGCGAGTTGGAACGCAGCGGACAGTCGGCGGCACCGGCATT
ACTCGTACTTGACACCGCAGCTCTTAACAAACATCTCCGTCGTGTCAAACAGCTCCTACT
CACAACCAACTTTGTGCTCATGGTGCCTACAGTTGTGCTACAAGAACTGGACAATTTGAA
GCGCGAGCAGAGCACAGCACGTAAAGCTATCCGTTGGTTGGAACTTCAATTAAAAAATGG
CTCAAGATTTCTGCGAGCACAACGTCCGAACCAGTCAAAGCCCCTGCCGCTCTTGAAATA
TCCCCGTAAAGCTCCAGCCCATATTAATAACTTTATTCAGATTTTAGAGTTCTGCAATCA
TTTCGTAGCGGAAGATAAAAAGACGCAAGGATCCGGTGATGCTGAAAACGTTTTACAAGG
GAAGTCTTCGTCTGTCCTTATACTACTCGTTGGCAATGCTGATGAAGATGAAGAACAGTA
TAAAGAATTTAGTGTTATGGGCGCAGCGCAATCGGCCGGCATTTCCGTAGAAAACATCGT
AGATTTCTACAGCAAATGGCGACAGACATCGCATAAAAACGGTAAAAAGAGGTGAACGCG
TGTCGATCACGAGACCGGTTTTGATCACTATGGAAAGAATGGACTTCGAGGATATCGATA
AAACGTCAAAAAGCTCTTGCGAGGTTTTGATAGAACACGTCCAAAACGCTCACTATTCAC
TATAAAAAAAAAAAAAAACTAATAATAATTTCATTGAAGGTAGCGCGGAAAATTTTCTAT
TGATGTATTGTATCAATAATAAATGTTTATATATCGGTGTAACATTATATAACCATCCAT
AAATTCATAATTCATAATGTATTCATATAG
(2250 bp)

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