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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29699_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:8.02 TPM:6.28
ORF EntryO_BomaASG12442_complete:A_BomaASG_c29699_g1_i1
Sequence
(Nucleotide)
TCCAGATTCAGCGGCGCCGTGTCTGTGTGTCCCATCCAGGACATGATGAACATTCTCGGG
AAGAAACCGGAGTTCTTCCAGGGCGCACCACGGATCACGTGTGCTCACGAGGGAACATTC
ATGGTGCTGGAGTGCGAGTCTAATGTGTTGCCAGCGAAGAAATCACGAAGTGACGAAAGT
ATGGAAGTAGTGTCGACGGATAACGACGAAGAGGATACGATGTTTGAATTAACCAAAGAG
CTGTTGAAGTCTGTGCTGTTCGCGATTACCGATATCGAGACCTTCCAGCCCAAGCCGAAG
CGGATAACAGTCGTCTCCCGGGTGTACCGGTTGCTCGGAGTCAAGAGCACCACGCCCGCC
GAACTCTTCTCCAGGAAGATTGAAAGCGGCAAGTACACGGAAGCCTTGGCTTTGGCTGAA
GAGTTTGGGCTGGACAGTGACTTGGTGTATCAGCAGCAGTGGAGGAAGAACCCCGTCTCT
ACAGAGGCCATACAGAAGTATTTGAGCAAAGTGTCTAAGAAGATCTGGGCGGTGCATCAG
TGCGTGGACCGACTCCCCGAGACGCTACCGGCCGCCAAAGAACTACTGCAATTCGGGATT
CAACTTACCAATGAGAGAATACTCGATGAAATAAATACGAACTCTGAGAACAAGATAGAA
GATCCTGACAACATTACCTTGGCGCATCTCAACGCGTACACGAGCGAGCTGCTGCGCTGT
AGGCACGTCATGCTCTTCTACAGAGATCGACTGGCGTTATATGAGGCGATTCTACGCTGT
GAGAAATCAACGTACGTGAAAGACGAGTACGACCGGCTCCGCAGCAACAGCATCGTGCAC
AGCGCCGCCGAGACCGCCAAGGAAGGCCGCGTCGAGGCGCTCACCTGTCTGTGGCCTCAA
ATCAAAACGGTCCCCATGCAGCTGGCGGTGCTCGAGAAACTACCGGAGACAATCAACCCC
ATAGACTATCAACATTTGTTACCCACCAAGCAGGTCGTGCAGTGGTTCGAGAAGAAGTCC
CCAATTAAACTGCCGCCGTCACAGTATGACAACGACTGGTGCCGCAAAGCCATCTTCAGG
TCGATATGGAGTTCCAACTGGTCGGAAGACTGTACTCCCGATGTCGAGACCGTCGCGGAT
GTCTTAATAGAAGACGAAGAGTTAGGGAAATGGTACGAAAAGAGAGCGAGGGAGATCGAA
GAGAGAAGCGGCATGGTTTCTCATTCTCTTACTCTTGTGACTATTGCGATGGTCGGCGGC
GGCGTTCAAGGCTTAGACAAAATTATGTTTCACCTCATGACCCTGGACACACTGGTCTAC
GATATAAACATCGAAGGGGTCACGCTGAAGCAGCTCGAAGGTCTGCCGCCGCTGGAAATT
TGCACGCTGCTCATGAAAACGTCGACGGCAGAAACGTTCGTGTCGGACTTGAAGCAGTAC
GTCATCCCGTACCTGAAGCGCCTGGAGAACAGGTCCAAGGTCAACGACGTCTGCATCAAC
GGCCTCATCGATTATCTGGTGCATATAAGCATTGAAGACTTGTCTTCTATACTCCTGGTG
TTGCAGTCACCGACGGAGTTCGCGCTAGATGTCTGCACTCATTTGGATCTAGTCGAAAAA
TGTTTCTTCGCCTACACCGGCACCGACCTGGAGAAAGCGAACGCCCTGCTGGACACTATA
CCGACAGAGAGCGACGGCAGCATGTCGACGGCG
(1713 bp)

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