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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29507_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		septin_and_tuftelin_interacting_protein_[Bombyx_mori]
Ontology
GO:0000390 P spliceosomal complex disassembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071008 C U2-type post-mRNA release spliceosomal complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.77 TPM:3.73
ORF EntryO_BomaASG12099_3prime_partial:A_BomaASG_c29507_g1_i1
Sequence
(Nucleotide)
CAAGTGTCACCATAAAGTTGTTTATAACCAAACAAAATAATTAACAATTTTTTTTAACCA
GCAAATCCGTCAGCTATAATTTTTATTTGTATAAACACAATTAATGCTGAGCTATTTTGG
TTAAGCTTAATTTATACGTAACAGTAAAATGTCAGACGATGAGGTTATAAAGTTTGAGAT
CACAGACTACGATTTGGATAATGAATTCAACCCCGGCCGTGGAAGAAAAGCTAACAAGGA
ACAACAAATATACGGTGTATGGGCCAAAGACAGTGATGATGATGAAAATGAAGATAATGT
TAGACAGAGAATACGTAAACCTAAAGATTTTTCTGCACCAATTGGTTTTGTGGCGGGTGG
AGTTCAACAGGCTGGCAAAAAAAAAGACAAGACTAAAGAAATAAAACCAGCTGAAGCGTC
TACTTCTGCTCCTAAGTACTCAGACAGTTCTGATGAGGAACCGGAGGTTCCAGTCGCGAG
TGACACAGCAGGAATTAGGAGACAGGGACAGGGAATGCGTCCACCATCGTTAGGTGGAAA
TGTGGGAAATTGGGAAAAACATACTAAAGGAATCGGAGCAAAATTGTTGTTGCAGATGGG
ATACCAGCCGGGTAAAGGTTTGGGTAAAGATTTGCAAGGTATCTCAGCGCCGGTCGAGGC
TACGCTGCGCAAAGGCCGAGGTGCGATCGGAGCTTACGGACCAGAAAAGGCAACGATAAA
AGCCAAAAAAGAGGAGGAACGTCGCATCAAAGATAAAGAAGATCAGGATAAAGATAAAAC
CGAAAAGAATTACAACTGGAAGAAATCGCACAAGGGTCGTTATTTTTACAGAGATGCCGC
TGACGTCATTCAGGAGGGTAAACCCACAACGTATACCATAGCAAGTAACGAGTTGTCCCG
CGTGCCCGTGATCGACATGACCGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCT
GCGGGCGCAGGCGCCGCGCTACGAGCACGAGCCCAGGAGGAAGTGCCAGAACTTCTCCGC
GCCGCAGCTGGTGCACAACCTCGAGGTCATGGTCGAGTGCTGCGAACAGGATATCATCCA
AAACGCCCGTGAACTGCAACAAGCTGAAGACGAGATAGTGGTGCTAGAGAGGGACATCGA
CGAATGCGACCAGCAGCTGAAGGAGCACGACGAGGTGATAGGCAAAGTCCAGGCGATCCT
CGAGAAGGTCGAGGAGCTCAACAAACCGGACGTCTCACTTGAGAAGGCCCATCAGGTGCT
GGCCAGCTTGAAGGAAACGTATCCAGCGGAATATGAGATGCTCGGTCTCGGCACGATAGC
CGGCAACATCGTGAGTCCTCTGCTGAGCGCGCTGCTGGCCACCTGGAGTCCGCTGGAGAA
CCCCGAGGAGCCTTTGCCGGTGTTCGTCAAGTGGAAGCAGGTCCTCACCGAGGAGGCGTT
CAACAGTTTGTTGTGGCAACACTACGTGCCGCACATCAGCAATGCCGTTGAGTCATGGAA
TCCTCGCACGCCGGAGCCAATGGTCCAGGCTCTAACGTCG
(1540 bp)

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