SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29498_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
Ontology
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:2.61 TPM:2.05
ORF EntryO_BomaASG12091_complete:A_BomaASG_c29498_g1_i2
Sequence
(Nucleotide)
AGGTGTTATGTGCCTATAAACCATGTTAGACCTTCAAACTCCGGATTTTATGGCTATTTT
TGGAAATTACATGCGTGAAGGAGTTATCCACGAAGAAAAAGTATAAATAACAAAAGTTTG
TTGCCCGTTTTCTCCAAATTAATAAATTGTATCATATTCCCTTCATCAACTCATGGTCAT
CCATCCAATTATGGAGTGTTGAGATTAAAGAAGAATCAACTGTGTATATGAAAAGTGTCC
GTCGTAATTTGATTATGGTGGCGCCACATTAGCATCAAGGTATTTTAAAAGAAGCGCCAA
ATATTATTAGAGTGAGTTTGATAGATACTTTTTCATAGAATGAAATTTAGTAAATCAATA
ATAGTACCATTCACAGTTTACAAAATAAAATCACTCTAGGTTAGGGATGGACGTTTAAAA
TATACATCGATGTTTTTTTCGATGTGATGCATCGATCGGTCACATCGATGGTAATACGAT
GTATTGGGAAATACATCGATGGTAATACGATGTATTGGGAAATACATCGATGGTAATACG
ATGTATTGGGAAATACATCGATGGTAATACGATGTATTGGGAAATACATCGATGTTTCTT
ATATATCGATTGTTTTAGGTTAGGCATTAATTAAAACAAAAATATGTATTAATCAGGAAA
TATATGTATTAAAATTAAAAATCACCGAGACAACACATTTTTTTTACATATTCCAATATT
TTTTGTCAATGCTATGTAAAAACAAAAGTTTGCTTAATCTCTTCCCCTTCAGCCGGTTTC
TTTGTTCAGTCATAACTAGCCCTGCCTGTGAAAAAAGTCTTTCTGAAGGGACTGACGTGC
CAACTATTGTTAAATACTTAAAAGCTATTTTGTACAGCTTCGGGAATTGTATTTTGTAAT
CTCTCCAAATTTCTAACGGATTTTCTTTAAGTCTTCCAACAGGAGTTCGGAGATAAACGG
AAAGTTCGTCAGACAAAACGTCTTCAGATTTGTTAATTTTCCAGTTACGATGCACTAACT
TATGGTGATCAGTCCATAATGAAAAGGCCTCTTCATTTTTATCGGACTTGTCAGAATCGG
ACTCAGGTTCTTCATTGCTATGCAAATTCTTCTTCATTAAATCTTTAATTTTCGTAACAG
CATTCGAACAAGCTATCGGATCATTGAAATACATTCTTTTAAACCGTGGATCTAAAATAC
TTGCGATAGCCAGAGCATTCACATGTTCTATTGAACCCATTCTTTTATTTATTTCATTAA
TAGCAAGTTTCTGCACCTCTTTCGCTACGGGATCTTCTATAACAGCTGAAGTTATTTTAG
AGAGCATGCAACGAACTAAGGGAATAATTTTACTACTTGTGCAGTATTTATCACCTGAAA
TTTCTTTTGTAGCCGCTTCTAAGGGTCGCAATACCATGATGACAGACGATACAGTAGATA
TTTCCGATGCACTCAGCATTGCAGGTGCTCTAGGGTGGCGGAAGAGAATATCATTTATGA
CACTACGGAGTTCTAGAAATCTTTGTAACATATAATATGTACTGTTCCAGCGAGTATCCA
CGCTTTGTATTAATTTTACCTCAGCTGCTCCAGCAGAAGACTCCGTAGCCGCAGCAGTAG
CTTTACGTAATTCATCACTAGCAATGCAACTCTGTTTAAACCAAGTCACTATTGATTTTA
CTTTAGAAACAATGTTTCTCCACTCAATACATATCATTGTGCCTTCAGCCACCAAATTCA
GAGTATGGGCAAAACATGGGATGTGTTTCCTTCTACCAAACGCTAATTCGATCGCCTTAA
CTATATTGGCTGCGTTGTCAGTAACAACAACTGTTACATTCTCTTGATCGATTTTCCAGT
CTTGACATACCTTTAAGAGAATTTCAGAAAGATAATCTGATGTATGTCTTTCATCCAATT
CGTACACACCTAAGGTGACTGAATATAGTTCAATGTCTATTCCGAAATGTGCTGTGATGC
CCAAAAAACTTTTCATATTCAAGGTATCCGACCAAATATCTGTTGTTAGGGTTATATCTT
CTATAGAGGACAACATTTTCTTAATTGTTTCTGAAATTACTTCATATTTATCGTCCAGCC
AGCGTCTTAGAGTTGTTCTACTCGGGAGCTTATATTGAGGAGCAACTGTTTTCATTAGAG
TTTTGAAGCCTTCGTTTTCAACGATTGAGAATGGCTGATGGTCTTTGCAAATCATGAATA
ACAAACAGTTGTTCAGTTTCCTTGTCTTCGCTCCAGATTCTGAGTAAGAGGAAATATCTT
TAAAAGCGGCCTGTATTGTTCTTTGGCGTTTTAAAGGTGTAACGTTTTCGTCTAAGTCTG
AATCAATGGTTTCATTTACGGTTTTTGGTAACGGTGCACCGGATCTTTGACTGCCACTGC
AACTTGGAACAGGTTGAAACTGAAGTACTCCATCATCCATTTTATTATAAGGCGTAACTT
TGGTATCCAGATCCAGAGGATTCGATATTTCGTCTGTAGTAGTTACTGCATTGAATGTAG
TTTGTTTCGGCTGAATTTCGAGATAAGCAGCCTTATGAACATTACGAATATGTCCAATTA
AGTTCGTAGTGTTTCCAGCAGACTTAATTTCCTTTTGACATAGTTTGCATTTCGTTTTCT
TATCGTCAATTTTGTTAAAGAACTGCCAAACGGAACTTTTTTTCTTAGGTCCCATTATAA
CTGAAAGTAAAAAACAAAACTATATAGGACTGTTTACAGGGAATTTATAATAATACCTAT
TAACTGCCTAGTAGAATACAAATAAGTATAAGCCGCATTTTAATCGATAATATTAATATA
GTAATTATCGATAACTTGGCATCACTACAATAGATAGTATTATTATTTCACGGTAAAAAA
TATAACCTTTCAATCAAATCGTATCATATTGCGAAATTAATGCATTCGTCGTAAAGTAGG
TACATAATCTTCTCTTTTATATCTTAGTTATAAGCACGCGCAATATAAAACGTAAAATAT
AATAATTGCTTTGTACTTTTTGACAACAAAACAATGTGTCATTTCCAGTAAAGTTTCACT
AGCAAAACCATTATCATTATCACTAAATACATTATTCTATTTATTAATACACATACCTGA
CATACCTGTTCATAAATTAGTTTCTTTTTTAGATTTAAACAAGGCAAAAACTCGTATCCT
AACAAAAACACAATATACATTTACACAGCAGAAACTCGGTCGGCCATATTGTTGTTTTGG
TTTAATTAATATTGGCAGCACTGATTATAACGTTTCGTTTCTCTTTTCACTCATAGTATA
GTAATCTCATAATTTGCGTACCTAATCGATGCATCGAATGAAAAACATCGATATATATTC
GATGTTGAAGTATTTACAATACATCGGTTCAAGACGATGCATCGTTACTATACATCGAGT
ATTTTAAATAAATCGATGTATATCGTCCATCGCTACTCTAGGTGCACGTTTTCTTGTAAT
AATTCTTGAAGGTTATATTGACTTCATTATTTTCTGCAACATAAGTTGTTGAACTTTTCA
ATAATTAGCTACTTTAGTCTAAATGATATAATTTTTTTTAACTTTGCCATATTTCAATTC
GTCTATAATAGGTACATTCATATCACCCTTTGTCTACATTAGACCGATTGTGAAAGGTTT
ATTTATTGTTATTTATAGCATACGGCTGGACACTTTTTGAACTTTTCTCCCATACGAGAT
GATTCTCCGTCTTTACCCTCCATAGATCGGAAGAG
(3755 bp)

- SilkBase 1999-2023 -