SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29421_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]
Ontology
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
Transcript
Level		FPKM:3.05 TPM:2.38
ORF EntryO_BomaASG11983_internal:A_BomaASG_c29421_g1_i3
Sequence
(Nucleotide)
ACAGCGACCAGTGCCTTAGACGTGGTCGGAGTTCCACCTGAAATGAACGACTTGGAGGTA
TCAAATTCTGCGTTTAACGCTATAAATGTGACGTCACCAAATGCACCTATTGTCATCAAT
AATTGCACGATACAAAACAATAGAGGTTATGGCGTGTACGTGAACTCTACATACGGCATG
GTAAAAATAGAAAACTGTATGATACATGATAATGGAGGTGACGGTGTCAGATATGTTGTT
CATGAGATTAATCTCGATGAGAGATTTGATAGAAGCGAAATTTTCGATTTATGCACCCTT
GCTTCGACTCCTAGTCAGACGTTTCCTATTCAAATGTCCATAGAACAATCAAGGTACTCT
AACATGGAAAGAGATTGTAACCAAAAATTTTATACAATATCCGACCACGTTCTCACGCTG
AGTTTTCTCAAAATTTTGACAAATCAAAACGACACTGGTGAGATATATGTTTACGATGGA
TTGACGACTGACGACAGATTGTTATTGAGTTTCAGCTTAAGGAATTTCACACGACCACAA
AGTGTAACGTCGACTAGAAATAGAATGTATGTAAGATTTCGTGCCAATACCAGAACTGAT
ATCACGGGATTTTTAAGGTTAACATCGGGAGTCAGCAAGACCTACGATTTAAATGTAACC
GACACGATTATCTCAGACAACAATGGGAGAGGCGTGGCTATTGAAAACCTTAGATCTCAG
ATTCACATACATCGAACTTCGATATCCAATAACAATCACGTAGCTGGTCTACATGTTGTC
AGCGGCGCAGGTGATGTCAATGTAACAGAGAGCAGAATATCGTTCAACCAAGGAGATGGT
GTCAATATAACTGTAACCGGTGGTAATAGGAATATTTCTAGAAGCATACTGAGTTCCAAT
CAAGGTCACGCCGTAGCCGTTTGGCTAAATGATACTTCGGAGACTGAATATGTAGCATTG
AACCAAACAACAGTAATCGAATATTCAGAAATATTTAAAAACCTTGACGTGGGAATAATG
CACGGAAACTTTTGTGGCAATAGTTGGGTAAACATTACAGGTAATTGGTTTAATACGAGC
AGCGAAAGTACAATAAATATCTTAACTTGTTGGAAACTCAACAACCCGACCAAATTATTG
AACCTTCAAATCGGACACAATAGGTTTTATGAAAATCAAAAAGTCCCGGTGAAAATACAA
CCTGCACTGAATGTAAACGGTAGAATCGAACACAATTATTTTGAACAAGGAAGTTATGGT
GCCATAGTTATACTAAATAGGATAGAAGGAAACTATATTGAAGAATTCGAAATGTTACCG
GCTAATTTCCGTATCCAACAAAATTATTTTTTTGGCAATCGAGGCCCTTTCGTTGTCAAC
CTGGGCTTATCACCCTACAGTGATATTCAATACATATTGTTCACTCGTAACTACCTAAGA
GACAACAAAATAAAACAATCTTTTGAGCCTATAGAAGGTCAAAATACTCGGCTAACTCCT
AGAAGTAGAGTGGCCGCTACCATAGTATTATCTTCTAGTAATATTGACGTTTTTAGAAAC
ATAATT
(1566 bp)

- SilkBase 1999-2023 -