SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29401_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX43_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:7.19 TPM:5.63
ORF EntryO_BomaASG11957_5prime_partial:A_BomaASG_c29401_g1_i1
Sequence
(Nucleotide)
TAGAATGTTGGACATGGGTTTTGAGCCTCAAATCAGGAAGTCACTATTTGATGTAAGGCC
TGATCGTCAAACAGTAATGACATCAGCAACATGGCCTACTGGAGTACGCCGCCTTGCTGA
ATCTTACATGAAAGATCCCATCCAAGTTAATGTTGGATCATTGGATTTAGCAGCAGTGCA
CACTGTCACACAACAAATTATGTTTGTAGAAGAAGATGACAAAGAAGCAGCTCTGTTTGA
CTTTTTGTATAATATGGAACCTACTGATAAGGTCATCATATTTTGTGGCAAGAAAGCAGT
TGCTACCCACATTACTACTGAATTATGCCTTAAAGGTATACAATGCCAATCTTTACATGG
CGATAGGGATCAAAGTGATCGTGAGGCAGCTTTGGAAGACATGCTAGATGGGACAGTCAA
CATTTTGATTGCCACTGATGTTGCATCTCGAGGAATTGATATAAAAGATTTGACACATGT
TGTGAATTTTGATTTTCCAAGGCATATTGAAGAATACGTACACAGGGTGGGGAGAACAGG
ACGTGCAGGAAAAACAGGAATAGCTCTTTCTTTTGTCTCAAGAAACGATTGGGCTCATGC
AGCTGAGCTCATAAAGATACTTGAAGAAGCAAATCAAGAAGTTCCTCAAGAGTTAGAGGA
CATGGCGCAAAGATTTCAAGCTATGAAGATTAGAAGAGAGCAAGAGCCCGGTAGGGGGGG
AGGACGTGGAGGTGGAAGAGGGGGTAGAGGGAGAGGCAGATGGTAATTAATAAAAGAACC
ATCGATTCAGTAAGATATGTCTGTAATAATAATGCAAGACTACTTAAATTAATAAAGTAC
AACTCAAAACTAATTGAACTTTACCAACATAGTATTTGTGTACTTTAAGTTACAACAATC
GTTTCACTCTTGACAGAGTGGTTGTGATCGTCATGTAGTGGTTGGAGGGGGTAGACATGA
CACATCTCACAATGTCTCACCATCTATTCCTGCTCGAGGCCTCTTAGGTAACATATCATT
GGTAAATTAATAATATTTCACCATAAGATTTAAATTTCAGATTGCAATAGCTAAAACAGG
ATGTTCCCATAAGGTTTTATTTAAATAACAAATCTAGTCTTATAGTAAAAAAAAGGATCT
ATTGTACTACCAAAAAACAAAATATTGAACTGTGCAGTAACAACAAAAATATGGTATCTA
GTTACTGGCTGCAAATAGATTTAAAGGCACTAAAGAAACCTAGGGCTTTATTAAAAATGT
CTCATTTTGTAGTTTTCAGTATTCTTAATAGT
(1292 bp)

- SilkBase 1999-2023 -