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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29364_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_Ddx1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0007283 P spermatogenesis
GO:0008026 F helicase activity
GO:0008143 F poly(A) binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0033677 F DNA/RNA helicase activity
GO:0042254 P ribosome biogenesis
GO:0048477 P oogenesis
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1903506 P regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:34.27 TPM:26.82
ORF EntryO_BomaASG11905_complete:A_BomaASG_c29364_g1_i1
Sequence
(Nucleotide)
GCTATGGTCACCGGTACCCATCTGTGCACATACATACCGTACGCTGAATAAAACTGAAAA
CACTATTTAAAATAGCATAATTCTTTAAAAGATGACTGCTTTCGAAGAATTTGGTGTGCT
GCCTGAAATAGGCAAAGCTATTGAAGAAATGGATTGGACTCTACCCACTGATGTCCAAGC
CGAAGCTATTCCCCTAATCTTAGGCGGTGGAGATGTACTTATGGCAGCCGAAACTGGCAG
TGGAAAGACAGGAGCATTCTGTTTACCTATATTGCAGATTGTCTGGGAAACCTTGAAAGA
TATGCAGGAAGGAAAAACCGGTAAAGTAATAACACAAACGTCTTCTGAGTGTACCATGTC
ATTTTTCGATCGCACTGACGCACTGGCTGTTACTCCCGACGGGTTACGGTGTCAATCCAG
AAATCAAAAAGACTGGCACGGGTGTAGGGCCACCAAAGGTCTTCATACGAAAGGTGCATA
TTACTTTGAAGCCACTGTCACTGATGAGGGCTTATGCCGTGTCGGCTGGTCTACACAAGC
GGCAAAGCTGGATCTTGGAACTGACAGGCTAGGCTATGGATTTGGTGGTACAGGCAAGAA
ATCAAATTGTAAGCAATTTGATGATTATGGCGAGGCTTATGGGATGAATGATGTAATTGG
CTGTTTCCTGAATTTAAATAATGGTGAAATTCGATACTCTAAAAACGGAGAAGACTTGGG
TGTGGCTTTCAGTCTTGATTCATCTAGAAAGTCAGACTGTTACTTCCCTGCAGTTGTCTT
GAAAAATGCTGAGATGAGTTTTAACTTTGGTGCCACACCATTTAAGTACCCACCACCAAA
CGGATACATAGCAATCAGTCAAGCACCCAAAGAAAACGTCAAGCAGAATGTTATAGCCGC
TGTAGCTTCAACAGATATTAAACCAGTGAATAATGCACCACAGGCTATTATTATTGAGCC
GTCCAGAGAATTAGCGGAGCAGACCTGTACACAATTTACGAAATTCAAGAAGTATTTAGA
AAATCCCAAAATTCGGGAGCTGCTGGTTGTTGGAGGTATAAATGTTAAAGATCAAATTAA
CCAGTTGAACTGTGGGGTGGATGTCGTCGTTGGGACGCCGGGACGCTTGGAAGACCTTAT
CCAAGGAGGATACTTATCACTGACACATTGCCGTTTCTTTGTCTTGGACGAGGCTGATGG
TCTCCTGAAAGCGGGTTACGGAGAACTGATTGAACGCCTCCATCGTCAGATCCCGAAGAT
AACATCCGATGGACGGAGACTGCAGATGGTTGTGTGTTCGGCAACCCTGCACGCATTCGA
AGTCAAGAAAATGGCTGAAAAATTAATGCACTTTCCGACTTGGGTCGATTTGAAAGGGGA
AGACGCAGTTCCTGAGACCGTACACCATGTTGTTGTGAACGTAGACCCGCAAAAGGACAG
CTCCTGGCAAACCCTGCGCAAGCACGTGCAGACCGACGGTGTGCACGCTAAGGACAACAT
TCGAAGCGGCAACACAACGCCCGAAACATTGTCTGAAGCTGTTAAGATACTGAAGGGAGA
ATACTGTGTGCGCGCCATCAGGGAACACAAAATGGACCGGGCCATAATATTCTGCCGCAC
TAAACTGGATTGCGACAACCTCGAGCGGTACTTCAAAACGTTCGGCAATGAGCTGTCCTG
TGTTTGCCTGCACGGCGACCGAAAACCAAAGGAGCGCAAAGACAATTTGGAGATATTCAA
GAACAGCCAAGTGAAGTTTTTGATTTGCACCGACGTCGCTGCTCGCGGCATCGACATCTC
GGGCCTGCCTTTCATGATCAACATAACGCTTCCCGACGAAAAGTCCAACTACGTACATCG
CATCGGGCGCGTCGGTCGCGCGGAACGCATGGGCCTGGCCATCAGTCTCGTCTCCACCGT
ACCCGAAAAGGTATGGTATCATGGCGAGTGGTGTTCATCTCGCGGACGGAACTGCTGGAA
CACTAATCTGATTGACGACAAACCTAAGGGATGCTGCATGTGGTACAATGAACCTCAGTA
CCTGGCGGATATTGAAGATCACCTAAATATCACGATACAGCAAGTCGAGACAGATATGAA
AGTCCCATCCAATGAGTTTGACGGTAAAGTAGTTTACGGTGAAAAAAGAAAACAAGCTGG
TTCCGGATACCAAGACCATGTCAGTCAAATGGCGCCTGTTGTGAAATCTCTGCAAGAGCT
AGAGTCGCAAGCACAACTCTACTATCTTAAAATGCATCATAATGTCTCCATTTCCTGAAT
CAGAAATATAATTAAAATCTCTACTAATTTATTGTCGCATATTAATTAAACTGATTAGAG
CGCAGGTGACTTTTATTTAAAATAAATATTTA
(2372 bp)

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