SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29245_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		polyglutamine-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008022 F protein C-terminus binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031175 P neuron projection development
GO:0060271 P cilium assembly
GO:0072372 C cilium
GO:0097546 C ciliary base
Transcript
Level		FPKM:15.21 TPM:11.90
ORF EntryO_BomaASG11797_complete:A_BomaASG_c29245_g1_i2
Sequence
(Nucleotide)
CAACACTGGCTACTACTACCAAGTTCATGTTGTTGTTGTAGATGTCTAAATAAGTGAATT
AAGAGTGATTTTACCTAGTTTTCATTACGTTATAACGGGAATAAAATCAGCGAACACTCA
AAAACAACCAAAGAAATATCAACGCTACGCAAGATATACAACACAGCGAAATGCCTTTAC
CGCCGGCGTTAGCTGCTCGTTTAGCTAAAAGAGGTCTTTTGAAACAAAATGCAGATTCCA
CCGCTGTCGCATCTGTTGGTCAAATCAACGAAGAAATAATTGCAGAAGATTATGACAGTA
AGCCTAACGAAAATGGAAAAGATGAGCCTTGGGAAGGCTTTGTCGATCCTGTCAAAGGCC
ATCGAGGATGCCCTAATAAAAGTAATATTTATCATGAATGTTCTACTTTTTGTATTAAAA
GATGGAAGCAAGGTAAACTGGTACCGACTGAGACATATTTAGAACACAAGGAGAAAGTTT
TAGAGCTATGGCCCTTGCCACCAGGATGGGAAGAAGTGTTTGATGAAGGTTATGGTCAAC
ATTATTTTTGGAATGTGCACACTAATCTGGTTTCGTGGATACCACCCGGACATCCCCGTG
CTGTGCCTACGGAATCTGCCGCACAATTGCGCGAAGAACGTCTGATGAAAGAAGGCGACG
AAAGTGATGAAAGCAGTGAGGCCTCGGATCAGGAAGTTCCGCAGATTCAAAAAGATAAGA
AACCTGATCGCCGAGAAAGAGAAAAGGAACATTCACATCATAGAGACAAAAAAAGGCTCA
GGGTCAAAGATAATGACTTGGATCCAATGGACCCAGCATCTTACTCTGATGTACCTAGAG
GTAATTGGACATCAGGTTTAGATACACATTCTAAAACAGGTGTAGATACCACAGCCTCTG
GTTCACTCTATCAAATGAGGCCCTATCCAGCACCCGGAGCAATACTTGCAGCTAATGCAA
AACAACATTCTCCACCACCTTCACCATAAGACTTTCATTAGATTGTTTGCTATTATTATA
CGTAAACTCAGACCTGGCAGTTTTCTTTACATTAACCAAATTAAATGAAATGGTTAGCTG
CACTTGTTGTTCTTAATGAATTTGGTATGTAACATGTTTAATTTCTAAATGGGTAGAGCA
TGTAACCTACCCATTTGCAAGTCTTTTTAGCCTTCTCTGACATTTCTGAAGTTTTATGTA
TTTCTGCACGAAAGTATGCGAAGTAACAATTTATTTTTACAAAAATTCTTTTTTTATTGC
CCTTGTATGTAGAAGCTCTTGCTTACTATTAAGTACTCTCAACAAACCATTTTTGAATGC
CTGGCAAAAAACAATATTTTATAAATAGGTAAGAATAGACTTAGATATCTCAAATTCCAG
ATTTAGGTGTCAGTGAAATCAGATGCACATAATACTTATTTACAATACAAAGTAAAAAAA
ATTTTTTTGTTGAAAAAAAAAAAGATCG
(1468 bp)

- SilkBase 1999-2023 -