SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29236_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		U3_small_nucleolar_ribonucleoprotein_protein_IMP4_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0034457 C Mpp10 complex
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:2.68 TPM:2.10
ORF EntryO_BomaASG11789_complete:A_BomaASG_c29236_g1_i2
Sequence
(Nucleotide)
CTCAAATGATAAAAAAATAACTGTTCAGACGACTCGTGGCCGGTTCTTTCCAAACAAAAC
AACTTTAGGTCTATTCATGTGTTGCAAGTTATTTTAACTTGTAATAAAATTCTATTACAT
AGCAAAAACGAAACGCCAAATGTCAATCACAAAAAACAACACGTGCGTAAACGTCAGTTG
TCAATTGTCACCCGCGTTTTTTGTACCTTTTTACAAACAAACATTTGAAACATTAATTTA
AACAAAAATAAAATTGGTTATCGAATTCAACTATAGTAACGACAAACCAAAAATGCTGCG
ACGACAGGCGCGATTACGCCGCGAGTATTTATACCGGAAATCGGCTGAAGAAAAACAAAA
AAGTATACAAGCTAAAAAAGATCAAATCAAACGTAGTCTTGAAGAGAATATACCTATACA
TGGTGATTTACGGAAGGATGCCATCGCCTTACAGAAGAGAATTGAATATGAAGATAAAGG
ACCGGAAAGAGTGGCAGTAATCGGAGGATTCAGTGGTGGGGCAAACACACTCAATTCACA
GGATGATGAATACAGATATGCAGGTGTCGAGGATCCGAAGATCATGATTACCACATCCAG
AGAACCTAGTGCTAGGCTCAAGATGTTTGTAAAAGAACTGAGGTTAATATTTCCAAACAG
TCAGCGTATGAATAGAGGTGGTTATGAGATGTCACAATTGATTCATGCCTGTCGAGCCAA
TGATGTAACAGATTTCATAGTTGTGCACGAGCATCGAGGAGTTCCAGACAGTTTGGTAAT
ATGCCACCTCCCATATGGTCCAACAGCATCCTTCACATTATCGGGTGTTGTGATGAGACA
TGACATACCTGATATAGGACCAATGAGCGAACAGTATCCACATCTCATATTCCATAACTT
TAAGAGTAATCTTGGTTTACGTACAATGAGTATATTAAAGTACCTGTTTCCTGTACCAAA
GCCCGATTCGAAGAGAGTTATATCATTTGCGAACCATGATGATTACATATGCTTCAGGCA
ACATACATATAAATACATATAAAAAGGCAGGCAAGGATATTGAATTAACAGAAGTGGGTC
CACGTTTCCAAATGAGGTTATATGAGATCAAGCTCGGCACCCTGGAATCCCTGACGGCCG
CCGACACCGAGTGGGCGCTCCGCCCCTACATGAATACGGCTGCCAAGAGACGCTTCTTCA
GTGATGATGATGGATGGCAACAG
(1223 bp)

- SilkBase 1999-2023 -