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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29214_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		striatin-3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000159 C protein phosphatase type 2A complex
GO:0003700 F DNA-binding transcription factor activity
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0030425 C dendrite
GO:0032355 P response to estradiol
GO:0032403 F protein-containing complex binding
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051721 F protein phosphatase 2A binding
GO:0070016 F armadillo repeat domain binding
Transcript
Level		FPKM:27.37 TPM:21.42
ORF EntryO_BomaASG11779_complete:A_BomaASG_c29214_g1_i1
Sequence
(Nucleotide)
TAGCGAACGGACGTCGATGAGACTTTTCTTTCCGTCATGCAATAATTTTTGTCATTCATG
AAATCGTCGATAAAAATTATTTTAGATGGTGGCACATCTGTGGACGTTGTTTGAAAAATA
GTATTTAATAATGTGTTAGTATTTCATTTTAAATAGATCTTGGTCATAGTTATAATAGGT
GTGTGACAAGTTTAGTTCGGTAATGGTGGCCATGTCATGAAAATCCCTACAGCCATGGAT
GATAACTCCGTATCTCATCACAACGGAGGGCAAGTGGGATCTCAAATTGGAGTCAGTGTA
AATAATAAACAAAATGAAGAACCCAGTCAAAGTGTTCAGTATTCAATACCGGGCATTTTG
CATTTTATCCAACACGAATGGGCGAGATTCGAACTGGAGAGATCACAATGGGAGGTGGAC
AAAGCAGAATTTGAGGCACGGATCGCCTTTCTCCAAGGTGAGAGGAAGGGTCAAGAAAAT
TTAAAAAATGATCTCGTGAGGCGGATTAAAATGCTTGAATATGCATTAAAGCAAGAAAGA
GCAAAATTCCACAAGCTCAAGTATGGAGTGGAGTTGCAACAAGGAGACGTAAGGCCCCCG
CCGGAAGAGTCAGCGACAGAGCCCGAACCAGTGGAACGCACGCAATGGAAGCAGGGAAGA
CAATTTATAAAACAGTACTTGCAGGAAATAGGCTACACGGATACAATTCTGGATGTGCGC
TCGAATAGGGTACGCGCTCTCCTCGGTTTGAAGAACGATGATTCAGATAACTCGAACTAC
AGAAACTATGAAAAACAACAGCACGACAGATGCGATTACTCTGCGAACCATATGGTTCGC
AAATATGACTACGGTAAAGAGCCACGCAAAACGAGCGGTTCGTCTGGAGGCGGTTACAAT
GATGAAGGGATGTCCGTACAGGAGACAGCTGCAGTATTCGCTAACTTCGAGTTCTTGACC
AATCAAGAAATGGATATGGACGAAATTGACGATCTCGATGCCAAACAGACTCTTCACGCT
TCTGGTAAACAGGGTGAAGAGGTCGATCATGAAGCAGAAGAAGTTTTGAATGAGCTTAAT
ATGCTTACTATAAATGAAGTTGTGAGTGCTGGCCAGGGAGATGAGTATCAAGGTGGAGTA
ACGAGCGGCGGCAGTGCGAGTGCGAGTGCGGCGTCGAGCAGCGTCGGCAGCGGGAGCGGC
GCCGGGGAGGCTGACGAGGAGACGCTCGGACTCGGAGAGCTTGCCCAGCTCACCGTCAGC
AACGAGCCCGAAGCTTATGATGTTGCCGGCGCTAATAAAGAATCTTTCCGCAAGACGTGG
AACGCCAAATACACGCTCCGCTCGCACTTTGATGGGGTCCGCGCTATCGCATTCCATCCG
ACAGAAGCGGCGCTGGTGACAGCATCCGAGGATCACACGTTGAAGTTATGGAACTTGCAA
CGTACCGTACCTGCGAAGAGATCGGCCGGTCTGGATGTGGAGCCACTGTACACGTTCCGC
GCGCACTCAGCGCCCGTGCTCTGTCTCGCCATGGGGGCGCCACGCTCTGAGGAATGCTTC
TCCGGAGGGCTCGACGGCACCATTCGAGTCTGGAACCTACCTCCTCCCACCGCTGACCCC
TACGATCCGTACGATCCCGCTGTCCAGGGTGCGGTGCTACGCGAACACACGGATGCGGTG
TGGTCGCTGGCGAGTGCGTGCGGACGACTGGCGTCTGCATCGGCGGACGGCACGGTGCGG
CTGTGGGCGCCGCGAGCCCCGCGCCCCCTGCTGGCGACGCTGCGTCCGGACGACGGCCCG
CCCCCCGCCGCCGGGCCCGCCCTGGCGCCCTCGCCTGCGCCCGCTGCTCTCGACTTTGCC
GACGCAGCCTCGCGAGCCGCAGTCGCTTACCGCGACGGATCTCTTCTGCTCTACGACCTT
GAGACTGGCCAGGCCGTGTTGCGGTTGGGTTGCGACAGTCCCGCGAACCGCGTTCGTTCT
CATCCGACGCTGCCGATGTTGGTGACCGCGCACGAGGACCGACACATCCGGTTCTGGGAC
GCGGTCTCGGGGCAGTGCTCGCACGCGATGGTGGCCCACTTGGACGCCGTCACGGGACTC
GCCCTCGATCCCAACGGACTGTTCCTGCTATCGGGCTCGCACGACTGCTCCGTGCGCCTC
TGGAATCTCGACACGAAGACTTGCGTGCAGGAGATCACCGCGCACCGCAAGAAGTTCGAC
GAAAGCATCCTCGACGTCGCCTTCCACCCGCTGCGGCCGTACATCGCTAGTGCGGGCGCC
GACGGTCTCGCCAAAGTATTCGTCTGAATCGCGCGCGTCGCTCTATAAATAGTATACATA
CGTGTTATTTTGTTTTGAATGCGAACGTTTTGTAAGCGTCGGCCGCCGCCGTGTCTAGTC
CCCGGGCCGACCGGAGCAAGCGACGCGTGTGCTGTGCATGACCGCCTACGACTGCGGGAC
CGGTTCGCGTCGTCGTATCTAGTATTGTAATGTAATGACGCGCGCTAGACGCTCCCTTTG
GGCGCGTACTGAACACTCATCTATGTATAGACATTTGAAATCTATTATAATATATTTTTA
GACTTTCAGTACGTGAATTTTAGGTTTTATCGCGACTTTTTCACCAGTTTTACGATATGC
AGTGAGAATATTGTTCGTTTGTATGCATCGTTAAGCGATCTTATGATAAAAATATTATAT
AATAATATACAGATGGACACCGATGATATTTCTATTATAAGTTTTTATGTGTCTGTACAG
TTAGTATGTTACGCAGTATTTTGTATTCTATTGCAAAGAATGAATTGTCTTTCTTTAGCT
TGGATATTTAATTTTAAATCAATTCAATTTCTATGAAAAATTGTTTAAAATGCTCTCATA
TATAAATGCGAGTGGTGAGCGTTCGAACAAAAAAGAGTAGTGTTACTATATCGAAACTAT
GTAAGTAATGTTTGTTCGTAATGAGTACTGCGGTTGTAGAGTATAATTGTAAAACATTAC
GTATTCCTTTATTTTCCTCGAATTCATACTTGTACACATACATCCCAAAATTGATAGTAA
AAAGCAACATAACCGAAATCAAAAAAAAAAAAAG
(3094 bp)

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