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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29184_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		pre-mRNA-splicing_factor_ISY1_homolog_[Helicoverpa_armigera]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000384 F first spliceosomal transesterification activity
GO:0000389 P mRNA 3'-splice site recognition
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
GO:0071020 C post-spliceosomal complex
Transcript
Level		FPKM:6.01 TPM:4.71
ORF EntryO_BomaASG11726_complete:A_BomaASG_c29184_g1_i2
Sequence
(Nucleotide)
CAAAAACCAAAAACACATGCGTGCATTCGCTTGTACAAAATTGTCTAAATATTTGGTTTT
ACAGAACTAAAATTCATATAACAAAGAATATACTGCTTCTAAAAATGAATTATAGGTATC
GTGAAAGGATTTAGAGTTCATTTAAATAAAGTTGTATCTCGTCGATTTCAGTTGTAACAT
ATTTATTCAAGGAATTATCACTTTTTTTATGAGAATCTACCTCAAATACCATACAGCTCC
ACTATAAAATAAAGTTTTATTGAAATTTGAATGGTCTTGATCCCAAAAACCGAAATTGTA
AATACAATTTAAACCATGGCCAGAAACGCAGAGAAAGCAATGACAACACTAGCACGTTGG
CGTGCGGCACAAGTTCAGGAAGCGGGAGGCCAGCGAGAACGACGTCCGTATCTTGCATCA
GAATGTAATGATTTACCACAAGCCGAGAAGTGGAGGTTACAGATTGTCAGAGAAATTGCG
AAAAAAGTGGCACAGATACAGAATGCCGGTCTCGGAGAGTTCCGGATTCGCGATCTTAAC
GACGAAATTAATAAACTTATGAGGGAGAAGCGACATTGGGAGGTGCAGATTAAATCTTTG
GGCGGCCCCGATCATGCTCGAGTCGGTCCTAAAATGTTGGACCAGGACGGGAAAGAAGTG
CCGGGCAACCGGGGATACAAATACTTTGGAGCTGCAAAGGATTTACCCGGCGTGCGAGAG
CTATTCGAACAAGAGCCGCCTCCGCCCCCTCGCCGGACGAGAGCGGACCTCATGAGAGAC
GTCGACGCAGATTACTACGGCTACAGAGACGACGACGACGGCATTTTACTACCATTAGAA
CAAGAGGCTGAAAAAGCAGCGATAGCACGTGCAGTCGATGAATGGAAAAGAAACAAGGAA
CTCAACAAAGATCAAGACCTTCCCGAAGAGGAAAATATCTATCCTGAAGATCCTGACGAC
AAGAGGATGGAAGACGATGAAGAAGAACCCGAGAAAGCAACGGTCACCTCCCACGTGGCC
GTGCCGTCGCAGAGGGACGTCGAAGAAGCATTGCTCAGGAGGAAGAAGCAGGAACTAATG
GAGAAATATGGATGCCTAGACGCCAAAATAGAGAAGAGCTGACGGCCACCTAACATTTTT
CTGTGTGCTTAGTGCGAGTTTTT
(1163 bp)

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