SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29166_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032452 F histone demethylase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072718 P response to cisplatin
GO:0098869 P cellular oxidant detoxification
Transcript
Level		FPKM:17.79 TPM:13.92
ORF EntryO_BomaASG11707_3prime_partial:A_BomaASG_c29166_g1_i2
Sequence
(Nucleotide)
CCGCACCCCGCGCGGCGGCTGCTCCTCACGCAGATCGCGGCGGGCGGCGCGCTGGGGGCG
GCGGCGACGCGCGTGCACACCCTGCGCTCCGTGTTCGGTCTGCCCGCGTGCTCGTGCGGA
CACGCGCCCGCGCCCTCGCCGCAACACCGACAGCAAGCCAAGAACCTGCTGCAGATCGCG
CTCAATAAGAATGTGAAAAAGGAAGACGTCAAGGAAGAAAGTACTCCTACTAACGGTTCG
TCTCCCGTGAAATCTGAAAATGTAAAGACTGGCAGTTCCATCGTTAGCTGGCTGTCGGAT
TTGCCCATAAAGTCTGAGAGTAAAGACGAAAAGTCCGATTCTAGTACCTCGGATTCGGAT
GAAGGTGGAAATTATTCGACGTTGCGAGAGTTACTGATCAGGCCGGCTCCGGAAGGCGGA
GAGGTTCAACCGAAGAAGAAACAGAAGAAGAACAAGAGTGACGCACTCGAGGATGTCATC
TCCAGCATCGTCGACGAGAAGAAAGACGAAGACGAAGATGAGAAACCGTTCGTTCTCTCG
AATGTGGTTAAACGTTACGACAGGAGCGGACGCAGCCGCGAGGAGCTGCCCGTCAGAATT
ATGACCCTGACGGAATCGAAGCTTCTCTATCCTGATGTCCCGCACGCCTGGCTCTGTGAC
GGCAAACTGTTACACCTCACTGATGCGGTGCACGCCGGCAACTATAAACCCTTCCAGGAC
CAGTGGAAACGTGGTCAACCAGTTCTAGTCTCTGATGTATCTGCTCTGCTCGATAAGGAT
TTGTGGTCCCCTGAAAGTTTCTCACGCGATTTCGGTGACACTCGCGTAGATCTAGTGAAC
TGCGCGTCCGGTCTAGTCGTACCCAACCAGCCCGCTAGGAAGTTCTGGGATGGATTCGAT
CTCGCCGTCAAGCGGCTGCGAGACGAACGCGGCGCTCCCATGGTGCTCAAGCTCAAGGAC
TGGCCTCCGGGCGAAGACTTCGCCGAGCTGCTTCCGGCGCGCTTCGACGACCTCATGAGA
GCTCTCCCTCTCTCCGAGTACACCTCGCGCAACGGGAAACTGAACTTGGCCGCGCGCCTG
CCCGAGTGCTTCGTGCGACCCGACCTTGGACCCAAGATGTACACGGCGTACGGTGGCGCC
GGCGGGACCACCAACCTGCACCTCGACGTCAGCGACGCCGTCAACGTGATGGTGCACGCC
AGCGCGCCCGCCGACGCGCCCGAGCGAGCGCGGGAGGCGGCGCGCGCGGCCGAGGAGGCC
GGCGTGGACGTGCTGTCCCGGCGCCGCGCCCGCCTCAAGCCGCCCGCCGCGCTCTGGCAC
ATCTACGCCGCCAAGGACGCCGACAAGATCCGCGACTTCCTCGTGCGGGCTGAGCTCGAC
CGCGGTGCCCGCCCGCGCCCGCAGCACGACCCCGTCCACGACCAGACCTGGTACCTGGAC
GCGGCGCTGCGCGAGCGGCTGTACCGCGAGTACGGCGTGGAGGGGTACGCCATCCTGCAG
TGTCCGGGGGACGCCGTGTTCGTGCCGGCGGGGGCGCCGCATCAGGTGCGCAACCTGCTG
GACTGCATCAAGGTGGCGGAGGACTTCGTGTCGCCCGAGAACGTGTCGCGGTGCTTCGAG
CTCGCGCAGCAGTTCCGGCAGCTGTCGCGGCAGCACTCCAACAAGGAGGACAAGCTGCAG
ATCAAGAACATCGTGTACCACGCGGTGAAGGACTCCCTGTGCTGCCTCGAGGAGGCTCTC
GCGAAGGCCGAGTGAGTCGGGTCGCGAACACCTCCCGCATTTGATCTCAACCTCGAACGT
AGCTAAGTTCCGCATTTAACGTAAGATTGGGGGCGAGTGTGATGCGCGCTGTGTGAGTCG
CCGCGCGTCCGTTCGATTGTGTACCAGTTGTGTGTGTGAGTGTACTCGAAATGTGATTTT
AGTCCGTCGCGTTCGCCGCGAGTGGAGTATGTGCAATGTAAATTAGTCTGAATATGGTGA
TATCGTTGAGATGTGGATGTTTTATGTTCCTTAATCGAAATACAAATAAACTCTTCAAGT
TATCTACAGCTTGTAGCTATAATGGTATGTATCTATTGTGTAAATTTTAATTCGAATTCC
ATCGAGTACATTATAAGAAGTGTATACTTTTAAGTTATTGTATTTTGAAGTAAAACATAT
TCGCTCGAAGCATTGTACATTAAAACACAGCGTGTAGATAAGTTTATCCTATTATTAGAT
TTCTCAATTTGGTTAGTATGTTACAAAATGATAGTTAAAGTACGT
(2265 bp)

- SilkBase 1999-2023 -