SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29123_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		negative_elongation_factor_B_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0017053 C transcription repressor complex
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:8.61 TPM:6.73
ORF EntryO_BomaASG11613_3prime_partial:A_BomaASG_c29123_g1_i1
Sequence
(Nucleotide)
GCTTATTGTCAGTTGCTTGTCAATAATTTCTAAGCAGGAAACTTTAATTTATGTTATTTT
CTGTTGTTGTTAACTTTATTTAAGATTTATTTGTGTTGATTTGTTAAATGAACTGAAAAA
CTGAATTAAATTAAGATCGATGGCGTCGTCAAGTAAACTACCAGGCACTGGTCTAGAAGA
AGTGGGAGTACCAGGACAAACTTTCTTGCGAGATGCTCTGACAAGTTGTACCGACCCATT
GAAAGCTATTGAAGAGTTTCAACTTGAAAACGGTATTTTATTGCCTTCTTTAAGGCCGAT
GTTGCCTTTACTAGACCTGCATGGCGTTCGGCGGCTCGACTTTCATACATCAGTTCTGGA
GGAATTACGTGAAAAACTCATTGCACACATCAACGAGCTTGGCAATAAAGATAACAAGGA
TAATGACAAAAAACTCAAAGAACTGCTATCTAAAAGCTTCCCAGTCGTCAGAGTTAAAGC
TTTAAGACCTGTTATAATGGGTATTCTTAAAAATATCCCACATATAGATGATAAGTATCT
AAGGGTACTAGTTCGCGACAGAGAACTGTACAATGACACAGATACTGAGGTGAAGCGTCA
AATATGGCAAGACAACCAGTCACTGTTTGGAGATGAAGTTTCTCCACTCCTCAGTCAGTA
CATCAGGGAGAAAGAAGATGTTCTATTTGATCATGAAAATCTCACTAATCTATTTTTTTC
CCCTTCACCAAAAGTAAGGAGACAAGGTGCAGTTGTTCAGAAACTTGCCAGATCGG
(776 bp)

- SilkBase 1999-2023 -