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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c29013_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		FACT_complex_subunit_spt16_isoform_X1_[Bombyx_mori]
Ontology
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
Transcript
Level		FPKM:18.87 TPM:14.77
ORF EntryO_BomaASG11408_complete:A_BomaASG_c29013_g1_i3
Sequence
(Nucleotide)
AGTGTTATGTCGTGGAGTCGTGATTATTTGTACTTTGCGGCTTAAAAACGTTGCTTATTA
GTTGCAGTTTATGTTTAAATATTTTTCACAATGTCTAATATATCATTGGACAAAGAGACG
TTTTATCGTCGCATGAAAAAGCTGTATGCGACCTGGAAGGCTGTTGCTTCAGATCCTAAG
AGTGATGATGCCCTATCAAAGGTGGATTGCTTAGTGTCGTGTGTAGGAGTAGATGAAGAG
ACACTCTACAGCAAATCAACATCACTTCAGACATGGCTGTTTGGATATGAGTTACCTGAC
ACAATCACTGTCTTAACAGAGCATAGCATGTGCTTTTTAGCCAGTAAGAAGAAGATTGAA
TTCCTGAGACAAATAGAAAATGGTAAAGATGAAACTGAATTGCCCCCAGCAAAACTTCTT
ATTAGAGACAGAAATGACAAAGACAAGGAAAACTTCAACAAACTTCTCCAAGAAATAAAG
AAATCAAAATCAGGCAAGACACTGGGTATTTTCGTGAAAGACAATTATCCAGGTGAATTT
TGTGAAAGTTGGAAAGCAGTTCTGAAGGGAGAGAAGTTTGAAAATGTCGATGTCAGTTCA
GCGATTGCATTATTAATGGCGCCAAAAGAAGACTCTGAAATTATTACAATAAAAAAAGCA
TGTCTGGTCACAGTGGATGTCTTCACAAAATACTTAAAAGATCAGATAATGGAAATTATT
GATTCAGATAAGAAAGTCAAACATTCAAAACTTGCTGAAGGTGTGGAAACAGCAGTTTCA
GATAAGAAATATGTAACAGGAGTCGATACAAGTCAAGTTGACATGTGTTATCCTCCTATT
ATACAGTCAGGCGGACACTATAGTTTGAAATTCAGTGCAGTGTCTGATAAGAACCACTTA
CACTTTGGCGCCATAGTATGTTCACTAGGTGCTAGATACAAATCATATTGTTCGAACATA
GTCCGTACATTGCTGGTCAACCCAACTGATGAAGTACAAAGTAATTACAATTTCTTGTTA
AATATAGAAGAAGAGGTGATGAAGAGTCTTGTAGCTGGAGCGAAATTATCTACAGTTTAT
GAAGCTGGTCTAGCGTTAGCCAAGAAAGAGAAACCTAACTTAGTTGAAAATCTCACTAAG
AGTTTTGGATTCGCTATGGGTATAGAATTTCGTGAAAGTTCCATTATTATTGGACCTAAA
ACAAATGTTACCGCGAAAAAAGGAATGGTCTTCAACATAAACATTGGCTTGGCGAACTTA
ACAAACAGTAATGCCTCAGATAAGGAAGGGAAGACATACGCGCTCTTCATTGGTGACACA
GTATTAGTTAACGAAGAGCAGCCAGCGTCTCTACTAACACAGTCTAAGAAAAAAGTAAAA
AATATAGGAATATTCTTGAAAGATGACGATGAAGAAGAAGAAGAGGAGAAAGAAAACAAG
ACTGAAATACTCGAAAATGGAGGTAGAGGCAAAAGGACTGCAGTGATTGAATCGAAATTG
AGAACAGAGCATTCATCTGAGGAAAAACGTAAGGAGCATCAGCGTGAACTCGCTATATCC
TTGAACGAAAAGGCCAAAGAAAGATTAGCCAAACAGTCGACCGGTAAAGATACAGAAAAA
CTAAGGAAAAGCACTGTTTCATACAAGAGTATTAGTCAGATGCCACGTGAGAATGAAGTT
AAAGAATTAAAATTATATGTCGATCGTAAATACGAAACAGTAATCCTGCCAATATTCGGT
GTCCCAGTACCATTCCATATATCTACAATTAAGAACATCTCGCAGTCAGTGGAAGGCGAT
TACACGTACCTTAGAATTAACTTTTTCCATCCCGGCGCCACTATGGGCAGGAATGAAGGC
GGGAATTACTCTCAACCGGACGCCACCTTCGTTAAGGAAGTTACATACCGAAGTACAAAC
ACAAAAGAACCGGGTGAAATATCGCCGCCTTCGTCAAACCTGAACACTGGATTTAGACTT
ATTAAAGAAGTACAGAAAAAATTCAAAACCAGAGAAGCAGAAGAACGTGAAAAAGAAGAT
TTGGTGAAACAGGACACGTTAATATTATCACAGAATAAAGGAAATCCTAAGTTAAAAGAT
TTGTACATACGTCCCAATATTGTTACGAAGAGAATGAGTGGTTCATTAGAAGCTCACACA
AACGGCTTTAGATTCACATCGGTACGAGGCGATAAAGTGGACATTTTGTACAATAATATA
AAGAATGCATTCTTTCAGCCTTGTGATGGAGAAATGATTATACTTTTACATTTCCATTTG
AAACATGCCATTATGTTTGGTAAAAAAAAGCACGTGGACGTGCAATTTTACACCGAAGTC
GGTGAGATAACCACGGACTTAGGGAAGCATCAACACATGCACGACCGCGACGACCTCGCC
GCCGAGCAGAGCGAACGCGAGCTGAGACACAAACTGAAGGTGGCCTTCAAGAGCTTCTGT
GAACGAGTCGAGAACATGACCAAGCAGGAAGTCGAGTTCGATACACCTTTCAGAGAGCTT
GGTTTCCCTGGAGCTCCATATCGGAGTACAGTTTTACTGCAGCCTACCTCCGGAGCCCTT
GTCAATCTTACTGAATGGCCACCATTCGTGATTGCATTAGAAGATGTAGAGCTCGTCCAC
TTTGAGAGAGTACAATTTCACCTAAAAAATTTCGATATGGTCTTCGTATTTAAGGACTAC
GCCAAGAAAGTGGCCATGGTTAATGCCGTGCCTATGGACATGCTGGATCATGTCAAAGAA
TGGTTGAATTCTTGTGATATCCGGTACTCGGAGGGTATACAATCGTTGAACTGGACCAAA
GTTATGAAAACTATAACAGATGACATTGAGGGCTTCTTCGAAAATGGTGGATGGTCATTT
TTGGATCCAGAATCTGATGGTGAAAATGAACAAGAGGAGGAAGATAGTGAAGATGAAGAT
GAAGCGTACGAGCCTACGGACGCCGAGTCTGATGAATCTGAAGGGTCTGACTATGATTCT
GAGGCGTCTGATGAATCTGACGCTTCGGGTGATAGTGAAGAGGAAGATGAAGAATCCGGT
AAAGACTGGTCAGATTTAGAGCGGGAAGCTGCCGAAGAGGACAAAAAAGACCGCAACTTC
GATCGAGATGACTTCGACCGGAAACGTAAAGGACGAAACCAACAACGCTCGTACGACTCT
GATGAGGGAGCCGCCAAGAAAAGCAAACATGACAAGTCTAATCATAAAAGTTCTAGTTCA
AACCACAAAAGCTCTAGTTCAAATCATAAAAGTTCGAGCTCAAACCATAAAAGCTCCAGC
CATAAAAGCCCTTCAAAGAACAGTAGCAGCCCTTCCAAAAACCGGGATAAGCACCACAAA
TCATCCCACCATGACCGACACCACAAGAGTGACCATAAGTCCTCTAGTAAAGACAAAGAC
AAGAAACATTCTAGTGACCATAAATCACACAAACGGTCACGCGATGACAGCAGAGATCAC
GGCAACAGCGCAAAGAAAGCGAAAAAATAAAAAAGCAAACGTTTTGATACAAAGGATTCA
AACGGGTTTCATTCGCCACAGCGGCTTGTTAATAATAATTACGTATGTGATTGTGTCGTC
TCATAATTTGTCCGTCTAATGTTAAAAAACAGGTCTGAGTGTTTTTGTATGTATGTTGTT
AATAAATTTTCAGTTGAGAATGTGACACGATAATAGTTAAGTAAATTTAAATAAATAAAG
AACCTGTGCCCCACTTACACAGCACACGATATTGTCTTTTCCCGAAAAAAGCAAACTGAA
TAAGAAAAATAAGAATTCATAATCTGTGTGTATTTTATTTATTTTTAAATCATAAATAAC
ACGATTAAAAATAAAATAACAAAAAAGTATTATAACCCCAAAATTAAGATTAGGAAATAT
TCAGTTAGTAGTTATTAGTAAATATATGTACAG
(3933 bp)

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