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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28965_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RFWD2_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.76 TPM:1.38
ORF EntryO_BomaASG11250_5prime_partial:A_BomaASG_c28965_g1_i1
Sequence
(Nucleotide)
AGATCGGAAGAGCGTCGTTCCTGCCACCTGGCCTTCGGCTCCGCAGACCACTGCGTGCAC
TACTACGACCTGCGCTCGCCGCGCGCGCCGCTGGCCGTGTTCCGGGACCACCGCAAGGCG
GTCTCGTACGTGAAGTTCCTGGACGGCGGCACGCTGGTGTCCGCCTCCACGGACTCGCAG
CTCAAGCTGTGGCGCGTGGAGTCCCCGCGCTGCGTGCGCTCCTTCACCGGACACACCAAC
GAGAAGAACTTTGTGGGGCTGGCCACCGACGGCCGCTACGTGGCGTGCGGCTCGGAGAAC
AACGCGCTCTACGTGTACCACAGCGGCCTGGCGCGCCCCTGCCTCGCCTACAGGTTCGAC
CCCGCGCGCCCCCTCCTCGAGCGCGACCGCCGCGACGAGGAGCCCGCAGAGTTCGTCTCC
GCCGTCTGCTGGAGGAGGGCGGCCTCCCGCCCCGCCCTCCTCGCCGCCAACAGCCACGGC
ACCATCAAGGTCCTCGAGCTCGTCTGACAACCCCTTTCCCCAACCCCTTCCTACCTGCGG
GAGAGACAGCCCACACCGGAGAAAATACATTAATTTTTTACAATCCGTATTATTCACAAA
TTAGTTTACAATCCGAGATTGTATTGAACCGGGAATCTGCAATCTTCGTTAACAGGCGGA
AATGATAAAATGTAGTTATTCTCAAGTAAGATTATTTAAAGTAAAATCGAATACACATTC
AAGATATAATGCACCGTGTGCTCATAGATGTAAAGAGTAAAATTGTGCACGGGTCAGTTC
CCTCGGCAGCCCTCCCTCCCGCACCCCCCGCTCCCGCCCCGCGCGCGACCGAGACACCCA
ACAGTTAGTTTATAAAATTTTTATTTTAATGAAAATTATAGATGTTAATCAGTGAAGTCG
TTTTGTATTTGTGTGTGCGTATGTAAACATGAGCAGATCGGAAGAGC
(947 bp)

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