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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28616_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_3_[Bombyx_mori]
Ontology
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.43 TPM:3.46
ORF EntryO_BomaASG10721_5prime_partial:A_BomaASG_c28616_g1_i2
Sequence
(Nucleotide)
CATAGGCACCTTTAAGAAGACGGAACTCCTTGTATTTTTCCTTGAATGTAGCTAATAATT
ACATCGTGATTAAATACTTATATTTCACTTAATTTTTCTGTACTATGAAGAATGGAATGC
GAACATTGTTAGATAACGTCAAATTGGAACAAATCAAAGTCGAGGACACAAAAATCACAA
AGAACTTCAGTTGTTCAGAATGTTCAGTACCAGAACAGAACTGGCTTTGCCTACATTGTG
GTGCGGTGAACTGTGGTCGTTATGTAAATGGCCATGCGAAGAACCATGCTGACACACTCG
GACACCAGCTTTGCATTAGCTGTGATGCTTATTCTGTATATTGTTACAAATGTGATGATT
ACATTATAAATGATACTAAGAACAATATAGATACAATAAGGCAATGTATTATACGGATAA
GGCAACAAAATGATGAAAAAGAAAACAGTAGAGAAAAGCAGGAAGATAGCAGACAAGATA
AAGATGACTGTGATGCCAATATACCTGGTTTGGTCACTGCTTCAGATGATACAGTGCTCA
ATGTTATTGAAGGAGATATAGCAGTGCAACCAACAAGCTCTTCTTTAGATCCTCACAGTA
CAGAAATTGAAAACTGTGATAGTAAACTTGATAAATGTATTAAGGGGACTGAAGAATCTA
TACGAAGTCTTAGACCAAGATCGAGGAAGAGAACTCATTCCGAGGACAGTAGCTCAACTG
AAAACTCATTACAGATAAACAGAAAAGATAAAAAGCGATCGCCTTCTAATGGAAAGCTCC
AGAGAGAAAAAAAAGTTGTAGGATTAAAAAATTTAGGCAACACATGTTTCATGAATGCAG
TTCTTCAGAGTCTGAACAATATACAAGAATTTAGTTGTTATTTCAATCAATTACCTTCTT
TGGAGATGAAGGCTAATGGCAGGAAGGTGTATCATTCAAGGAGTTATACACGACAGGAGG
TGAATGATGTTGTAATGGCTGAAGAACTCCGTAAGGTGTTGATAAATCTCAATACTGGTG
GATGCGGTTCGAAAGGTGCTATTTCACCGGAGTGCTTGTTCCTTGTGATCTGGAAGGTGG
TACCGAGGTTTAGGGGCTATCAGCAGCAGGACGCACATGAGTTTCTCAGATACATGCTGG
ACAGATTACACACGGAACTGCTGCAACTGCTGCCCCCCGAGAAGCCGGAGCCCGGGTTCG
TGGCGCGGCCTCCGTCGGCGTCCATCGTCACTGCTGTGTTCGGGGGAACATTGCAGAGCG
AGGTTCGTTGCTTGGCGTGTGGCACGGAAAGCAAGAAGTACGACCCTTTCTTGGATCTCT
CACTGGAATTACCAGAAGTCGGAAGAAATGATACGCCCGTCGCTCTTTCGGATTGTCTCG
CCAGCTTTGTACAGGTCGAG
(1400 bp)

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