SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28559_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
Transcript
Level		FPKM:18.80 TPM:14.71
ORF EntryO_BomaASG10661_complete:A_BomaASG_c28559_g1_i3
Sequence
(Nucleotide)
GTTCAGTCGTGTTTTGTTTCTCGTAGACAATCGTTTTCACAGTGAAATCTCAGGAACGAA
CACGGCTTTGAGCAAGCCGGATGGTCAATAAAAAATCTCAGTCAATAAAATTACAACCAC
GCGATACATGTCTATGAATAGAAGTGCGTTGTTTGTTTACCACTTGTTATCGCGTTTACT
TGAGACGACGGCCGTGGGAGGAATCCGACGGTTTCTGAACATATGTGATTCATGTGCCAC
CGGGCGCGCTCATAGGAACATCGATTAACGATCCGCGCGAATATGACCAAAGTGAAGTAC
AGACCAACGAAGTGCAAAGGAAAATTTCATCATTTTTGTCAAAGTTTAAGAGGGGCGGTG
TGTGAGTGTCGCACCGCCATGTCGCACCACAGCGACGAGCATGCGTTGCTCACAACCACT
TCCGACTCGTTCTGGGAGCCTGGTAACTACAAGAGGACCACCAAGAGAGTAGACGACGGA
CATCGACTGTGCAGCGAACTTCAAACCCTGGTCCAAGAGCGTGCCGATATCGAGAAGGCG
TACGCGAAAAGCCTCAGAGGATGGGCTAAGAAATGGAATGATTTGATCGAAAAGGGACCA
GAATACGGCACAATGGAAGCTGCTTGGAAGGGCAGCATGGTGGAAGCGGAACGACTTTCA
GACCTACACCTCAGCGTCAGGGATAGGCTGGTGAACGACGTTATGGCACAGATAAAGAAC
TGGCAGAAGGAAACTTATCATAAGTCAATGATTCAACTAAAAGAACGCAAGGAAATGGAT
GAAGCATTCAAGAAGGCCCAGAAACCATGGTCGAAATTACTTCAGAAGGTGGAACGCGCC
AGGCTAGAATACCACACGGCTTGCAAACAAGAAAGGACAGCACAGAACCAGGAAAGAAAC
GCCAGCGGAGACAGCTCTTTTAGTCCAGATCAGGTCAAGAAAATGGCAGATCGTGTATCG
AAATGTCGCGACGAAGTGTCAAAGAACCGAGAAAAATACCAGACAGCTCTAGCCGAGATC
ACGGCGTACAACCCTCGATACATAGAGGACATGACTTCAGTATTCGATAGGTGCCAACAG
ATGGAAGCGCAGCGATTGAAATTCTTCAAAGATGTGCTGTTTAGCTTCCACAAATGCCTC
AACATAAGTCAAGAACCGAGCTTACCGCAAATCTACGAAGAGTTTCACCACACGATCAAC
AACGCAGACAGCCAGAAGGACCTCAAGTGGTGGGCCAACAACCACGGGGTCAATATGGCG
ATGGCCTGGCCTCAATTCGAGGAGTACACCGAGGAGTTCCGGGACATCGCCAAGGGCAAG
TCCAAGGAGAGCCTGCCCACCGGACCGATCACGTTGCTCAATCAGCGGCCAGTCAGCGAG
GATGAGTTACCGCCAATAACGAATAACAAGACGAACAAAAGTAACAACCACTCGGAGCCC
CCCGCGCCCGCGCCCGCCGCCCCGCCCCTCTCCAACAACACCACCGCCAACAACACCATA
GACAAGAAGACCATCAGCGCTCCCATCGCCGTCACTAACGGCACGGCGGGCGGCCCGAAG
TCGAACAAGTCGTCGCCCGCGCGGGAGGGCGCCGACAACCCGTTCGAGGAGGAGGAGTGG
GACGGGGACGGGGAGGGGGGCGCGCTCACGGACTCCGGCGAGCCCGGCCTGCCCGTGCGC
GCGCTCTACGACTACACCGGCGCAGAGAGCGACGAGCTCTCCTTCCGGCAGGGAGACCTG
TTTGAGAAGTTGGAGGATGAAGACGAGCAGGGCTGGTGCAAGGGACGCAAGGACGGGCGC
GTGGGGCTCTACCCGGCCAACTACGTGGAGCCCGTGGGCCACTAGCGCCGCCGCCCACAC
GAGAGTCCCAGCACGACTGAATATATTATCTAAATATTATAAATATATCAGAACTTTCAT
CAACGTCGTAAACTGAATTACTTGTAGATTTTTTTTAAGAGAAAATCTTCAATTGGAATC
GTTTACATTAAATTTTATTTATATTTATCGAGAACAGCGCGTCGTATTGTCTATTATTAT
TCATAGCAACATTTGGATTCACGAATACATACATACACGAGTACATAATTAATTTATTAG
CGAGTCGCGAATTAGTCATTAGAGTACAGGAGGACATTTGTATGAGCAGTCTAGTACGAG
CGACTCTACGCTTCGCTTCGTCGAATCATATATCATCCATTTGTGATATATTTTAAATGT
AAATGTGCAGCGAAATATTTCTATAAAATTTACCGATCGATAAAAAAAAACAAAAATGTT
TCTATACACGATATTCCTCGCTATTGTAGGATATTTATACAATTTTCAATAATTTTTAGT
GACGTGCCGTATTCTTGTAGTGTGTTATATCGATGTGGTTTGAGTAGATTCAAATCGATG
ATGCGTATAAAATGAAATATGTGAAATAATTTTTTAAGATAGCGAAGCGGTTTAATTGGC
TTCGTTTTCGATTTATGAATAATTAATTGACTTAGAACGTATATTTTTGGATAAAAATTG
TTAGCTACAATTTGCACGTAAACCAAAAAAATGTTTATTTGTGTTAGTGACATCGTATTA
TTGTTTCTATGAACTTTGTTAACTGAATAACATCGTCGAACAAAGCTTGAGAATAACTAG
TTGGACACCACTGCCTTTATCGGGCGCATTCAATTTAGCTAAGCCAAAAATTGTAGGCCA
ATATATAAATATATCGTAATAGGCAAACCAAACGTTTAGATGGCAATGGGACATATATAT
ATTTTGTGATATAAGCTCCTGTCGGTGGGTGTCGTTGTCTGTAGGTGTGGTTGTGTACAT
ACACGCTTTTAATGATGTAATACTTGTCGTGAATGTATAGAGTATTTATTTCCCATTGTA
TATAATGTGTAATTTATGTGAGAATTTAAATTTGGTTAATATCGATAGTGTTGATTGGAA
TATATTGTAGTTTTTTTTTTTTTTTAGTTAAAGCTTTTTATGGACGCAACGTTATAAGGA
TGCGTTGTTTTAACAAAGGAAAATGTTTTAAAGCAATTTTTATTCGTGGCTCGATAGCTA
TCGATATAAATCAACTCTAGTATTAATATTACGATAGGGCGCATAAAACATTAATGACTG
ATTATTGGCCTAGTGGTTTTTGACGGCTCGATTTAAGCTTCCATTTTGGCTGCCGGTTCT
CATTCTAAGGTGCTACTCCCACGTCTCCCGCACCAGCGCAGACATGTGCACTGTATCCCA
ACTAAATATGCCACTACCGCATTTTACGCTACATTTGACGCAAATATGAAATTGCCAAAT
AGAGCATTTACGAAAAGAAGTTTTGCACGACGCAAGCGCCCTCTCGTCATTAGTTTTAAA
AAATATCATTAATATATTACGAAGATGTTTACCTTTATTTTTCTTTTTCCTTTTGTACCT
CGTTATATTGTTGTAATGTGATTATGACGGGGAGTCATACATAGTCACGAGGCTGAATCC
GAACACCTCCTAGACTACTTGTATCGCGTTAGTAGCGACTTGTTTATATTAAATAACATT
GTTATAGGTTCAGCAACCTTTTGTGAAAATTATTTGTATTATATTATTATTATCAGAGAG
GTGGTTCTGGACCACTTATGTTAATATATTAATAATATTGGTAATTAAATTGTTACATAT
GTGAAAAAAAAAAAAAA
(3677 bp)

- SilkBase 1999-2023 -