SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28559_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
Transcript
Level		FPKM:3.46 TPM:2.70
ORF EntryO_BomaASG10660_complete:A_BomaASG_c28559_g1_i2
Sequence
(Nucleotide)
GTTCAGTCGTGTTTTGTTTCTCGTAGACAATCGTTTTCACAGTGAAATCTCAGGTAGTTT
TATCGAAACAATAACGTCGCTTTGTCCTCTATTTGTTCTCTTGGAACGAACACGGCTTTG
AGCAAGCCGGATGGTCAATAAAAAATCTCAGTCAATAAAATTACAACCACGCGATACATG
TCTATGAATAGAAGTGCGTTGTTTGTTTACCACTTGTTATCGCGTTTACTTGAGACGACG
GCCGTGGGAGGAATCCGACGGTTTCTGAACATATGTGATTCATGTGCCACCGGGCGCGCT
CATAGGAACATCGATTAACGATCCGCGCGAATATGACCAAAGTGAAGTACAGACCAACGA
AGTGCAAAGGAAAATTTCATCATTTTTGTCAAAGTTTAAGAGGGGCGGTGTGTGAGTGTC
GCACCGCCATGTCGCACCACAGCGACGAGCATGCGTTGCTCACAACCACTTCCGACTCGT
TCTGGGAGCCTGGTAACTACAAGAGGACCACCAAGAGAGTAGACGACGGACATCGACTGT
GCAGCGAACTTCAAACCCTGGTCCAAGAGCGTGCCGATATCGAGAAGGCGTACGCGAAAA
GCCTCAGAGGATGGGCTAAGAAATGGAATGATTTGATCGAAAAGGGACCAGAATACGGCA
CAATGGAAGCTGCTTGGAAGGGCAGCATGGTGGAAGCGGAACGACTTTCAGACCTACACC
TCAGCGTCAGGGATAGGCTGGTGAACGACGTTATGGCACAGATAAAGAACTGGCAGAAGG
AAACTTATCATAAGTCAATGATTCAACTAAAAGAACGCAAGGAAATGGATGAAGCATTCA
AGAAGGCCCAGAAACCATGGTCGAAATTACTTCAGAAGGTGGAACGCGCCAGGCTAGAAT
ACCACACGGCTTGCAAACAAGAAAGGACAGCACAGAACCAGGAAAGAAACGCCAGCGGAG
ACAGCTCTTTTAGTCCAGATCAGGTCAAGAAAATGGCAGATCGTGTATCGAAATGTCGCG
ACGAAGTGTCAAAGAACCGAGAAAAATACCAGACAGCTCTAGCCGAGATCACGGCGTACA
ACCCTCGATACATAGAGGACATGACTTCAGTATTCGATAGGTGCCAACAGATGGAAGCGC
AGCGATTGAAATTCTTCAAAGATGTGCTGTTTAGCTTCCACAAATGCCTCAACATAAGTC
AAGAACCGAGCTTACCGCAAATCTACGAAGAGTTTCACCACACGATCAACAACGCAGACA
GCCAGAAGGACCTCAAGTGGTGGGCCAACAACCACGGGGTCAATATGGCGATGGCCTGGC
CTCAATTCGAGGAGTACACCGAGGAGTTCCGGGACATCGCCAAGGGCAAGTCCAAGGAGA
GCCTGCCCACCGGACCGATCACGTTGCTCAATCAGCGGCCAGTCAGCGAGGATGAGTTAC
CGCCAATAACGAATAACAAGACGAACAAAAGTAACAACCACTCGGAGCCCCCCGCGCCCG
CGCCCGCCGCCCCGCCCCTCTCCAACAACACCACCGCCAACAACACCATAGACAAGAAGA
CCATCAGCGCTCCCATCGCCGTCACTAACGGCACGGCGGGCGGCCCGAAGTCGAACAAGT
CGTCGCCCGCGCGGGAGGGCGCCGACAACCCGTTCGAGGAGGAGGAGTGGGACGGGGACG
GGGAGGGGGGCGCGCTCACGGACTCCGGCGAGCCCGGCCTGCCCGTGCGCGCGCTCTACG
ACTACACCGGCGCAGAGAGCGACGAGCTCTCCTTCCGGCAGGGAGACCTGTTTGAGAAGT
TGGAGGATGAAGACGAGCAGGGCTGGTGCAAGGGACGCAAGGACGGGCGCGTGGGGCTCT
ACCCGGCCAACTACGTGGAGCCCGTGGGCCACTAGCGCCGCCGCCCACACGAGAGTCCCA
GCACGACTGAATATATTATCTAAATATTATAAATATATCAGAACTTTCATCAACGTCGTA
AACTGAATTACTTGTAGATTTTTTTTAAGAGAAAATCTTCAATTGGAATCGTTTACATTA
AATTTTATTTATATTTATCGAGAACAGCGCGTCGTATTGTCTATTATTATTCATAGCAAC
ATTTGGATTCACGAATACATACATACACGAGTACATAATTAATTTATTAGCGAGTCGCGA
ATTAGTCATTAGAGTACAGGAGGACATTTGTATGAGCAGTCTAGTACGAGCGACTCTACG
CTTCGCTTCGTCGAATCATATATCATCCATTTGTGATATATTTTAAATGTAAATGTGCAG
CGAAATATTTCTATAAAATTTACCGATCGATAAAAAAAAACAAAAATGTTTCTATACACG
ATATTCCTCGCTATTGTAGGATATTTATACAATTTTCAATAATTTTTAGTGACGTGCCGT
ATTCTTGTAGTGTGTTATATCGATGTGGTTTGAGTAGATTCAAATCGATGATGCGTATAA
AATGAAATATGTGAAATAATTTTTTAAGATAGCGAAGCGGTTTAATTGGCTTCGTTTTCG
ATTTATGAATAATTAATTGACTTAGAACGTATATTTTTGGATAAAAATTGTTAGCTACAA
TTTGCACGTAAACCAAAAAAATGTTTATTTGTGTTAGTGACATCGTATTATTGTTTCTAT
GAACTTTGTTAACTGAATAACATCGTCGAACAAAGCTTGAGAATAACTAGTTGGACACCA
CTGCCTTTATCGGGCGCATTCAATTTAGCTAAGCCAAAAATTGTAGGCCAATATATAAAT
ATATCGTAATAGGCAAACCAAACGTTTAGATGGCAATGGGACATATATATATTTTGTGAT
ATAAGCTCCTGTCGGTGGGTGTCGTTGTCTGTAGGTGTGGTTGTGTACATACACGCTTTT
AATGATGTAATACTTGTCGTGAATGTATAGAGTATTTATTTCCCATTGTATATAATGTGT
AATTTATGTGAGAATTTAAATTTGGTTAATATCGATAGTGTTGATTGGAATATATTGTAG
TTTTTTTTTTTTTTTAGTTAAAGCTTTTTATGGACGCAACGTTATAAGGATGCGTTGTTT
TAACAAAGGAAAATGTTTTAAAGCAATTTTTATTCGTGGCTCGATAGCTATCGATATAAA
TCAACTCTAGTATTAATATTACGATAGGGCGCATAAAACATTAATGACTGATTATTGGCC
TAGTGGTTTTTGACGGCTCGATTTAAGCTTCCATTTTGGCTGCCGGTTCTCATTCTAAGG
TGCTACTCCCACGTCTCCCGCACCAGCGCAGACATGTGCACTGTATCCCAACTAAATATG
CCACTACCGCATTTTACGCTACATTTGACGCAAATATGAAATTGCCAAATAGAGCATTTA
CGAAAAGAAGTTTTGCACGACGCAAGCGCCCTCTCGTCATTAGTTTTAAAAAATATCATT
AATATATTACGAAGATGTTTACCTTTATTTTTCTTTTTCCTTTTGTACCTCGTTATATTG
TTGTAATGTGATTATGACGGGGAGTCATACATAGTCACGAGGCTGAATCCGAACACCTCC
TAGACTACTTGTATCGCGTTAGTAGCGACTTGTTTATATTAAATAACATTGTTATAGGTT
CAGCAACCTTTTGTGAAAATTATTTGTATTATATTATTATTATCAGAGAGGTGGTTCTGG
ACCACTTATGTTAATATATTAATAATATTGGTAATTAAATTGTTACATATGTGAAAAAAA
AAAAAAA
(3727 bp)

- SilkBase 1999-2023 -