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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c28553_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_initiation_protein_SPT3_homolog_[Bombyx_mori]
Ontology
GO:0000124 C SAGA complex
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0016578 P histone deubiquitination
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:3.89 TPM:3.04
ORF EntryO_BomaASG10643_5prime_partial:A_BomaASG_c28553_g1_i1
Sequence
(Nucleotide)
CACATATTGATGTGATAAAACTAATAGACGAAGCTGATGAAGTGAGTCAGATAAAATTCG
ATGCGATCGATTACTTAAGGAAAGTGCGAGCTTCGAAATTAACAGAGTCAATGTCTTTTG
AAAAGTATGAAGCCTATCATAAGGCTAGATGTAGTTCTTTCCGTTGCAATGGCTATGGAA
TCGGTAAAGGCTTTATAAAATTAGAAAGGTGGATCAATCCAACCAAGGAACTCAAAATTA
GTCACTCGGCATTGGAAGTATTGTGTTTTATTGCTTACGAAACTGTGGCTGAAATTGTTG
ATGCCGTGTATTTGATTCGACAAGATGCCAAAAGAAAACACGGAGACCCTTTTAGTAAAT
ATGAAGGTGGATATTTCTGTAATCCCTTAAGTTTAAGTAATGCTGTTTATATAAAGTCAG
GTTATGAAGGAGTGCCTGCAATTACAGTGGCTGAAGTGAGAGAGGCATTGCGTCGTTACT
TTTGTCCTATAAATGGAATGAATGGATTATTTTATAGAAATATGCATATGGACTTACCAG
CAAGATTTATTGCTTTGTAAATTGCAAATTGTAATACCATTTTGTTTTACCATGAAAGAT
TGTGAGATCACATTTAGATACAAATGAGATCG
(632 bp)

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